Brachypodium distachyon (stiff brome): 100829632
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Entry
100829632 CDS
T01717
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A isoform X2
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100829632
Membrane trafficking [BR:
bdi04131
]
Protein recycling
Others
EARP complex
100829632
Endosome - Golgi transport
Tethering complex
GARP complex
100829632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
100829632
NCBI-ProteinID:
XP_003557717
UniProt:
I1H4L0
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All DBs
Position
1:complement(59109372..59121494)
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AA seq
699 aa
AA seq
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MEASTAAVVYDGQKQRFDLGVFVGDLPLDDDVASDNESLDGLQQELEDCKNDEEVANILA
NGIKLRDYTKGVENSIRQVELDSIQDYITESENLVLLHDQICDCDNILSQMETVLTGFQT
EIGSISSEIKVLQEKSMDMGLKLKNRKAAESKLSKFVEDIIVPPRMIDIIVDGEVNDEYM
RTLDILSKKIKFIEADSMVKSSKALKDVQPEVERLRQKAVSKIFEFVIQKFYALRKPKTN
IQILQQSVLKYKYIIIFLKEHAKEIHAEVRTAYIDTMNKVLSAHFRAYIQALEKLQLDIA
TSTDLLGVETRTTGYLFSIGKEPLKARSSVFALGERINILKDIDQPALIPHIAEAKSQKY
PYEVLFRSLQKLLIDTATSEYLFSDDFFGEESLFQDIFAGPIQVVDEYFNDVLLNCYDAI
GIMLMIRIIHQHQLIMFRRRIPCLDSYLDKVNMSLWPRFKMVFDLHLNSLRNANIKTLWE
DDVHPHYVTRRFAEFTASLVHLNVEYGDGQLDLNLDRLRMAIEDLLVKLAKMFPKPKLQT
VFLINNYDLTIAILKEATSDGGKAQLHFEEVLKSNIAIYVEELLLEHFCDLIKFVKTRTS
EDTGASSDKTSIVDVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILKAALTQLLL
YYTRLTECVKRINGGSALNKDLVSISSILYEIKKYSRTF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttccacagccgcggtagtgtacgacgggcagaagcagaggttcgacctcggg
gtcttcgtcggcgacctcccgctcgacgacgacgtggccagtgataatgagtcgctggac
gggctgcagcaggagctcgaggactgcaagaacgacgaggaagtggcaaacatcctggct
aatggcatcaaacttcgtgattacacaaaaggtgttgagaatagcatacgccaagttgag
ctggattctatacaggattacattacagaaagtgaaaacctagtattgctgcatgatcag
atttgtgattgtgataatattttgtcacaaatggaaactgtcctgactggattccagaca
gaaatcggttctataagttcagagataaaggtgcttcaggagaaatctatggatatggga
ttaaagttgaaaaatcggaaggctgcagagtctaaactgtcaaaatttgttgaggatata
atagtccctccaagaatgattgatataattgttgatggagaggttaatgatgaatacatg
agaacactagatatcctaagtaaaaagatcaaattcattgaagctgattccatggttaaa
tcatcaaaagctctaaaggatgttcaacctgaggttgagagacttaggcagaaagcagta
tcaaagattttcgaatttgttatccaaaagttctatgccttgagaaaaccaaaaacaaac
attcagattctacaacaaagtgtccttaaatacaaatacataataattttccttaaagag
catgctaaggagatacatgcagaagttcgcacagcttacattgataccatgaataaggtg
ctgagtgcacattttcgtgcttacatacaagctttagagaaattacagctggatatagca
acctccaccgacttacttggagttgaaactagaactacaggctaccttttctcaattgga
aaagagcctctgaaggcccgttcttcagtgtttgctctgggtgaaagaataaacatctta
aaggatattgatcagcctgcattgatacctcatatagctgaagccaagtcacagaagtac
ccatatgaagttcttttcagaagcttacaaaaacttctgattgatacagctacttcagag
taccttttctctgatgatttctttggcgaagaatccttattccaagatatatttgctggg
ccaattcaagttgttgacgagtattttaatgatgtacttctgaactgctacgacgcaata
ggaataatgcttatgatccggataattcatcagcaccagcttataatgtttaggcggcga
attccatgtttggactcctacctggacaaggttaatatgtcactctggcctcgcttcaag
atggtgtttgatttacatctgaacagcttgcggaatgctaatattaagactctctgggag
gatgatgtgcaccctcactatgtcactaggagatttgctgaatttacagcatctcttgtt
catctcaatgttgaatatggggatggtcagcttgatcttaatcttgatcgattacggatg
gctattgaagacttgctagttaagttggccaagatgttccctaaaccaaagttgcaaact
gttttcctgataaacaattatgatttaacgattgccatattgaaggaagctacctctgac
ggtggaaaagcacaacttcactttgaggaggtccttaagagcaacattgcaatatatgtg
gaagaattgcttctggagcatttctgtgatttgatcaagttcgttaaaacacgtacatcg
gaagacacaggtgcaagttcagacaagactagcatcgtagatgtcgagcctttggtgaag
gatttcgcgagccgatggaaggctgcaattgaactgatgcacaaagatgtcatcacatct
ttcagcaactttctgtgtggaatggagatcttgaaagcagctctcacacaactgctgctg
tactacaccaggttgaccgagtgtgtcaagaggatcaatggtggctctgccctcaacaag
gacttggtctccatatcctccatcttgtacgaaatcaagaaatactccaggacattttag
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