Brachypodium distachyon (stiff brome): 100829699
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Entry
100829699 CDS
T01717
Name
(RefSeq) lisH domain and HEAT repeat-containing protein KIAA1468
KO
K26154
RAB11-binding protein RELCH
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100829699
Membrane trafficking [BR:
bdi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100829699
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Filament
PUMA_CC
CEND1
Phage_GPO
MRP-S26
BST2
RNase_Y_N
ATG14
CATRA-C
Motif
Other DBs
NCBI-GeneID:
100829699
NCBI-ProteinID:
XP_003567750
UniProt:
I1HFL5
LinkDB
All DBs
Position
2:12275321..12286743
Genome browser
AA seq
1185 aa
AA seq
DB search
MDVAGAAGAAEERWASLCNCVVNFLLEERYHLTALELLQELQEDGRHAQTLRLRSFFSDP
ALFPPDQVARASSAPAGADPQNLLEEKIAAEEKLALTDYDLRLAKEDLSCLKTELQKRQE
SSPDNTNGSPSDAFTHEEFNQQDKREVKVSALGPLKDNERKDLNCAVKEYLLLAGYRLAA
MTLIEEVPDQDLDVWTNSSACVPDALRRYYYQYLSSTTEAAEEKISILRENEALRKDSKR
LCAEKDSLMKIRESANNQVATLRKSLETAHMDIKDKEKSFQDLKQSLDVHRKELNDCRAE
ITSLKMHIEGTQSSKEMSVRDSDGLTSQFIANSMGEAAALINEHQNLKGTESGTTKLASA
ASLTGDTREDNKNTESSIEGSPGSEAPVSWSTAEHRGYDTSGEDESGTNTSLEDISVNGN
LHGDGNSQGNSGSISVYVSEDKVHTEKVESPSKKKTSDKMALETIKIVSDALPKIVPYVL
INHREELLPLIICAIERHPDSDVRDSLTHTLFNLIKRPDGQQRRIIMDACVELAKSVGEM
RTETELLPQCWEQINHQYEERRLLVAQSCGELAVYVRPEIRDSLILSIVQQLVEDSATVV
REAATHNLALLLPLFPNMDKYYKVEELLFQLVCDTSRVVVDVALRELVPAVVRWGGKLDQ
ILRVLLSHILASVQRCPPISGVEGTIESHLRVLGEQERWNIEVLLRMLAELLPFVHQKAI
QTCPSTDAPTSSTAENFVSESSIKLYATGDTEWSAFEWMHTECLPDLIKLACLLPAKEDS
LRTAITKYLLAVSGHYGKDYLEHIMLPVFLVAAGDVDSGDFTYFPLSIQSKVRGLRPKTS
IAEKLAIICVLPLLLSGILGSPSSRQQLEEYLRKLLIQNTKDGSFSMCHTTEIIDAVRFL
CIFEQHHGVIFNILWEMVVSPDTDLKINAAALLKALVPYVGVKVASTHILPALITLGSDQ
NLAVKYASIDALGTVAQHFKNDMVVDKIHIQMDAFLEDGSHEATVSVIRALAVAVPHSTD
KLREYLLTKIIKLTSASPSGNDIERRRERANVFCEALRALDATDLPATSVRDLLLPSIQN
LLKDLDALDPAHKEALEVIARERSGGALESIGKAMGAHLGIASSVSSFFGESGLLGKKEG
AEQLDPAPPQPSLQTQQENTRFGRMMRGGFGDMLRGKAKGSEEPS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggcgggggccgccggcgccgcggaggaacggtgggcgtcgctgtgcaactgc
gtggtcaacttcctgttggaggagaggtaccacctcacggcactcgagctgctgcaggag
ctgcaggaggacggccgccacgcccagacgctacgcctccgctccttcttttccgaccct
gcgctcttccctcccgaccaggtcgcccgcgcctcctcagcaccggcaggtgccgatcca
cagaatttgctagaagagaaaatagcagctgaagaaaagttggcactcactgattatgat
ctccgactagccaaagaagatctttcctgcttgaagactgagttacaaaaacgacaagaa
tcatctcctgataatacaaatggatctccttcagatgcttttacacatgaagagtttaac
caacaggacaaacgggaagtcaaagtttcagcattaggccctctgaaagataacgagcgg
aaagatctgaactgtgctgtcaaagaatacctgcttttggctgggtatcgacttgcagcc
atgactctcattgaggaggttcctgatcaggaccttgatgtttggaccaacagttcagct
tgtgtgcctgatgcccttcgtcggtattactaccagtatctttcctctacaactgaggct
gctgaggaaaaaatatccattcttcgcgaaaatgaggcactaaggaaggacagtaaaagg
ctctgtgctgaaaaagactccttgatgaagatcagggaatctgctaataatcaggttgcc
actttaaggaagtctttggaaactgcacacatggacataaaagacaaagagaaatcgttt
caagacctgaagcaatcactggatgtccataggaaggagctgaatgactgcagagctgaa
attacatcccttaagatgcacattgaagggactcaatcaagtaaagaaatgtcagttcga
gattctgatggtttgacttcccagttcattgctaattctatgggagaagctgcagcattg
atcaatgaacatcaaaacctcaaaggaactgaatccggaactactaagctagcatcagca
gcgagtctaactggggacacacgggaagataataaaaatactgaaagtagtattgaaggt
tccccaggttcagaagccccagtttcttggtcaactgccgaacataggggttatgatact
tcaggagaagatgaatctggtacaaatacttcactggaagatatatctgttaatggcaat
ctacatggagatggtaatagccaggggaattcaggtagcatatctgtttatgtatctgaa
gataaagttcatactgagaaagtagagagtccaagtaagaaaaaaacgtcagataagatg
gccttggagactattaagatagtttcagatgctcttccgaagattgttccttatgtgctc
ataaaccatcgtgaggagcttcttccattgatcatttgtgctatagaaagacatccagat
agcgacgtgcgggattcattgactcacacattgttcaatctgataaagcggcctgacgga
caacagagacgcatcataatggatgcttgtgtggagctagccaagagtgttggtgagatg
aggacagagactgaattattaccacaatgttgggaacagataaatcatcaatatgaggag
cgtagattgcttgttgctcagtcttgtggagagctggcagtatatgttcgtcctgagata
cgtgattcccttatcttatctattgtgcaacaacttgtcgaagatagcgcaactgtagtg
agggaggctgcaacacataacctggcgttactgcttcctctgtttccaaacatggataaa
tattataaggttgaggagctattgtttcagttggtctgtgacacttctagggtagttgtg
gatgtggcactcagggaacttgttcctgcagtagtaagatggggaggtaaattggatcag
atattgagagtgttactatcacatatcctggcatctgttcagcgttgtccgcccatttcg
ggggttgagggtacaatagaatcacacctccgtgttttaggagaacaagagcgatggaac
attgaggtcctccttcggatgctggctgagttgttaccatttgttcaccagaaagctata
cagacgtgtccttcaacagatgcccctacaagctccacggcagaaaactttgtgtctgaa
tccagcataaagctgtatgcaacaggtgacacggaatggtcagcatttgagtggatgcac
actgagtgcctgccggatttgatcaagctcgcctgcttgttgcctgcgaaagaggatagc
ttaagaacagcgatcacgaagtacctgttggctgtatctgggcactatggaaaagattat
ttggagcacattatgttacctgtatttcttgtagcagctggtgatgtcgatagtggtgac
tttacctattttcctctgtcaatccaatccaaagtccgtggtttgcgtccaaaaacttct
attgctgaaaagcttgcaatcatctgtgtccttccattgctattgtctggtattttgggt
tctccttcaagtcgtcaacagttagaagaatatttgaggaaattacttatccaaaacacg
aaggatggttcattttctatgtgtcacacaactgagatcattgatgcggtccggtttctt
tgcatatttgagcagcaccatggagttatcttcaacattttgtgggagatggttgtgagc
cctgataccgatcttaaaatcaatgccgcagctttactgaaagcacttgtaccctatgtt
ggcgtcaaagttgcatcaactcatattttgccagcacttattactcttggatccgatcag
aacttggctgtaaaatatgctagtatagatgcattaggaactgtcgctcagcattttaaa
aatgacatggttgttgacaagatacatattcaaatggatgcttttctagaagatggatca
cacgaagctactgtttctgtcatccgtgcacttgcagtagctgtgccgcattcaacagat
aaactacgtgaatatcttttaacgaagataattaagctgacaagtgcctcaccttctgga
aacgatattgaacggcgtagggaaagagcaaatgtgttctgcgaagcactccgtgctctc
gatgctacagatcttcctgctacaagtgtgcgcgatctgcttttgccgtcaatacagaac
ttgttaaaggatctggatgctctagaccctgcacacaaggaggcattagaagttatagct
cgggaaaggtcgggaggtgcacttgagagcatcggcaaggcgatgggggcacatcttggg
attgcatcatctgtcagcagtttctttggcgagagcggcctccttgggaagaaagagggt
gcagagcagcttgaccctgctcctccccaacccagcttacaaactcagcaggagaacacg
aggtttggtcgcatgatgaggggtggttttggagacatgttacgaggcaaagcaaaaggc
agcgaggaacccagttga
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