Brachypodium distachyon (stiff brome): 100829820
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Entry
100829820 CDS
T01717
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100829820
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100829820
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
100829820
NCBI-ProteinID:
XP_003574527
UniProt:
I1I7C7
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Position
3:complement(38887681..38893237)
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AA seq
459 aa
AA seq
DB search
MPSGSTQFRYTQTPSKVLHLRNMPWEATEEELVELCKPFGRVVNTMCNVGANRNQAFVEF
ADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEDVQP
NDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLP
EHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQLTLGPDGKVKEPE
SNVLLASIENMQYAVGVDVLHTVFNSFGTVQKIAMFEKNGGMQALIQYPDISTAAVAKQA
LEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSRDYTASNPSAQVQAAGQAPGLSTAGVA
WQNTTPAASFYPSSAGGNPVGQVPAWNPNMQQGAFASASTSYPTQSLMANSGPHYPAVGS
SSGAPPMLYQAPQQMPQYGAPPAAPPHAPLAGQPMYFPK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcggggtcgacgcagttccgatacacgcagacgccgtccaaggtgctgcacctg
cggaatatgccgtgggaggccaccgaggaggagctcgtcgagctctgcaagcccttcggc
agggtcgtcaacaccatgtgcaacgtcggcgccaaccgcaaccaggccttcgtcgagttt
gcggatcaaaaccaggcaatttcaatggtttcatattatgcctcatcttcagaacctgct
caagttcgtggtaaaactgtatatatacagtattcaaataggcaagaaattaccaacaat
aaaggcaccggtgattcttctggcaatgtcctgcttgtcacttttgaagatgtccagccc
aatgatgttagcatagatgttattcatttggtattctctgcttttgggtttgttcacaag
atagcaacgtttgagaaagctgctggttttcaggcacttatccaatataccgatgcccca
actgctctagaagcaaaaaattcattggatggaagaagcatcccgagatatctgctccct
gagcatgtcagcatttgccacttgcgtataacattttctgcgcacaaagatctgaatatt
aaatttcagtcacatcgcagcagggattacacaaatccttatcttcctgttaatccaaca
gcaatcgagggaattgcacagctcacattagggcctgacgggaaggttaaggagcctgag
agcaatgtacttttagcatcaattgagaacatgcagtatgctgtgggagtggatgttcta
cacactgtgttcaattcttttggtactgtccaaaagattgcaatgtttgagaagaatggt
ggaatgcaggctctaatacaatatccagatatatccacagcagcagttgctaaacaagct
ttggaggggcattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgt
catactgatctcaatgtaaaggcacatgatgagagaagcagagactacacagcctcaaat
cctagcgcccaggtgcaagctgcaggtcaagccccaggtttaagcactgcaggagtggca
tggcaaaacaccacaccagctgcttccttttatccaagctcagctggagggaatcctgtt
ggacaagtgccagcatggaatcctaacatgcagcaaggggcttttgcctctgcatcaacg
tcttaccctacacaatcattgatggcaaactctggtccccactatcctgcagtaggatcc
agttccggcgcccccccaatgttgtaccaagctccacagcagatgccgcaatatggtgca
ccccctgctgctccacctcatgcaccattggctggccaaccgatgtacttcccgaaataa
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