Brachypodium distachyon (stiff brome): 100829877
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Entry
100829877 CDS
T01717
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100829877
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bdi00535
]
100829877
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100829877
Meiosis-specific proteins
Cohesin complex and associated proteins
100829877
Proteoglycans [BR:
bdi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100829877
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
MscS_porin
AAA_29
Motif
Other DBs
NCBI-GeneID:
100829877
NCBI-ProteinID:
XP_010234006
UniProt:
A0A0Q3GUT3
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Position
1:complement(14493594..14506222)
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AA seq
1204 aa
AA seq
DB search
MYIKKVIIEGFKSYREETSTELFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIVFDNSDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
ETANKRKQIDQVVHYLEDRLSELDEEKEELKKYQQLDKQRRSLEYTILDHELNDARNELA
SMDDNRRKISDSMSHADNEVVDVREKVKSVDKDIKTSTKGINEIKSQKEDAEKKHTEALK
VVSQIELDLRDIKDRISSEKRAKDEAVKDLYSVRRESERSKSELVEISRVHQAKLKEEEE
ISKSIMDREKRLSILYQKQGRATQFKNEAARDEWLQKEIHDLERVLLSNRKQESLLQEEI
QKLKDEINNLTNYIESRTSESSRLESALANKKKDSNDYMKQKEALQDERKSFWKEEKSVT
DEIDKLEEDLVKAKKSLDHATPGDIRRGLNSVNRIIRDHNITGVLGPVLELVDCEEKFFT
AVEVTAANSLFHVVVENDDISTRIIQVLTREKGGRVTFIPLNRVHAPNVNVPQSSDFVPL
LKKLKYRADHRRAFEQVFGRTVICRDLETATRVARSNSLDCITLDGDQVARKGGMTGGFY
DSRRSRLKFVKIIRDNKTAIDIKKVHLDNVGSKLKDIDKKITDLVSKHQQMDAERDHAKS
ELEQIKVDITSAMKQKASLEKALGKKEKSLDNIRNQIEQIQSGIAMKNDEMGTELIDQLT
FEERDLLSRLNPEITGLKEKFLLCKNSRIEIETRKEELETNLSTNLMRRQKELEAIISSA
DSETLPLEVESKEQQLKQSKRSLDESATLLKANVDAINNFTRKMEQLKRQRDDLKVLEAN
LEQTVQDGAKDLEQLMNSRSMHLAKQDECMKKIRDLGSLPADAFETYKRKNKKQLQKLLY
DTNEQLKQFSHVNQKALDQYVNFTEQREQLKTRRHELGLGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAGDDDNDEDGPREADPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMADTQFIATTFRPEILKVADKIYGVTHKNRVSYINVVTKEQALDFIEHDQT
HNAS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagaaggtcataatcgaagggtttaaaagctacagggaggagacctcaacg
gaacttttcagccccaaagtcaatgtagttgttggagcaaatggatctggcaaatcaaac
tttttccatgctataaggtttgtcctgagtgacatgtttcagaacctgcgcagtgaggac
aggggagctcttctccatgaaggtgctggacactcagttgtatctgcttttgtcgagata
gtgtttgacaattctgacaatcgtatcccagttgataaagaagaggtgcgcttgcgaagg
acagttgcttcaaagaaggatgagtactatttagatggaaaacatgtcagtaaaactgaa
gtaatgaatctgctggagagtgctggtttctctcgctctaatccatactatgttgtccag
cagggaaagattgcatcccttactctaatgaaagattctgaacgtctggatcttctcaaa
gagattggtggtacgcgagtttacgaagatagacgtcgggagagcttgaaaataatgcaa
gaaacagccaataaaaggaagcagattgatcaagttgtccactacctggaggacagactg
agtgaacttgatgaagagaaagaagaactaaagaagtaccagcagctggacaaacaaaga
agatcactcgagtatactatattggaccatgaactaaatgatgctagaaatgaattggct
tcgatggatgataaccgaagaaaaatttctgatagtatgtcgcatgcggacaatgaagtg
gtagatgtacgtgagaaggttaagagtgttgataaagacataaaaacctccactaaaggg
ataaatgaaatcaagtctcaaaaggaagatgcagagaagaagcatactgaagcactaaag
gtagtttctcagattgaacttgatttgagggatataaaagacagaatttcgagtgaaaaa
cgtgcaaaggatgaagctgtgaaggatttgtatagtgtgaggagagagagtgaaagatcg
aagtctgaactggttgaaattagtagggtgcaccaggccaagttaaaggaagaggaggag
atatcaaaaagcataatggatcgcgagaaacggttgagtatattgtaccaaaagcagggg
agggcaactcaatttaaaaatgaggctgccagagatgagtggcttcagaaggaaattcat
gatcttgagcgcgtacttctatcaaatagaaagcaggaaagcttacttcaagaagaaatt
cagaagcttaaagacgaaattaataacttgacaaactacattgagtcccggacaagtgaa
tcaagtaggttagagtctgcacttgcaaacaagaaaaaggattctaatgactatatgaag
cagaaagaagcacttcaagatgaaaggaaatcattttggaaggaggaaaaaagcgtgaca
gatgaaatcgacaaattagaggaagaccttgtgaaggcaaaaaagagtttggaccatgca
acgcccggggatatcaggagaggcctgaattctgttaacagaatcatcagggaccataat
atcacaggggttttgggtccagtgttagaactggttgactgcgaagagaagttctttaca
gctgttgaggtcactgctgcgaatagcttgttccatgtggtggttgaaaatgatgatata
tcaacgaggataattcaggtattgactcgagaaaaaggtggacgggtgactttcatacca
ctgaatagagtgcacgctccaaacgtcaatgttccacagagttctgatttcgttccgttg
ttaaagaagttgaagtatcgtgccgatcatcgtcgtgcttttgagcaggtttttggtagg
acagttatatgccgagacctggaaacggcaaccagagttgcacgtagcaatagtctagat
tgcatcacacttgatggtgatcaagttgcaagaaaaggtggtatgacaggaggtttctat
gactccaggcgctcaagactgaagtttgtaaaaataattagggacaataaaacagcaatt
gatataaaaaaggtgcatctggataatgtgggaagcaagctaaaagatatagataaaaaa
attacggatttggtaagcaaacatcagcaaatggacgctgaacgtgatcatgccaagtca
gagctggaacagattaaggttgatattactagtgcaatgaaacaaaaggcgtcacttgag
aaagcccttggaaagaaggaaaaatcactcgacaacatccgaaaccaaatcgagcaaatc
caatctggcattgcaatgaaaaatgatgagatgggcacagaactgattgaccagctaact
tttgaagaaagagatcttctttcgcgactgaatcctgaaattactggattaaaggagaag
tttctcttgtgtaaaaacagtcgcattgagattgaaacaaggaaagaagaactggagacc
aatttatcaactaatcttatgaggcgtcaaaaagagctggaagcaataatttcatctgca
gattcagaaaccttgcctctcgaagtcgaatcaaaggagcaacaactgaaacagtctaag
agaagtcttgatgagtcggctacactactgaaggctaatgttgatgctattaataacttt
acgagaaagatggaacaactgaaaagacaaagggatgatctgaaggttcttgaagctaat
ttggagcagactgtgcaagatggggcaaaggacttggaacagttgatgaacagcaggagc
atgcatctagccaagcaagatgagtgtatgaagaagatccgagatttgggctcattgcct
gctgatgcttttgaaacgtacaagagaaaaaacaagaagcagctacagaagctgctttat
gacaccaatgagcagttgaagcaatttagtcatgtcaaccaaaaagctcttgaccagtat
gtgaacttcactgagcaacgcgaacaactgaagactagacggcatgaacttggtcttggt
gatgagaaaattagagaattgatatcagttttagaccaaaggaaggatgaatcaattgaa
cgcacatttaaaggagttgcaaggcacttccgcgaagtgttctctgaattagtgcaaggc
ggccatggatatttggttatgatgaagaaaaaggatggtgacgctggtgatgatgacaat
gatgaggatgggcctcgtgaagcagatcctgaagggagaatagagaagtatattggtgtt
aaagtcaaggtttccttcactggcaagggagaaactcagtccatgaaacagttatctggg
ggacaaaagacggtggtggcattaacactgatttttgctatccaacgatgtgatccagct
ccgttctacctgtttgatgagattgatgctgctctggatcctcagtacagaacagctgtc
gggaatatgatccgacgtctagctgacatggcggacactcagttcatagcaactacattc
aggcctgagatattaaaagttgcagataaaatctacggcgtgacacacaagaatagagtg
agctacatcaatgtggtcaccaaagagcaagccctggacttcattgagcatgaccagacg
cataatgccagctga
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