Brachypodium distachyon (stiff brome): 100829954
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Entry
100829954 CDS
T01717
Name
(RefSeq) protein argonaute MEL1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100829954
03036 Chromosome and associated proteins [BR:
bdi03036
]
100829954
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100829954
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100829954
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100829954
microRNA pathway
RISC loading complex
100829954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100829954
NCBI-ProteinID:
XP_014754821
LinkDB
All DBs
Position
1:3446736..3455345
Genome browser
AA seq
1070 aa
AA seq
DB search
MAYCGGGGGGRGRGGGDQQYQAGYGGGRAGPMGGGGPGRGGGGGRAPTGFVWPPPGASTP
RPVQVPVPVPYGGQPATVVYRNPAATGPHQGVYQHGVVFRGPAPTPPAPAYPFAPAPVTI
RAPSPPPSPSAAPFQPARVSAPPPTPAAAPAAPSAASVAKELEQKLFVSETALAPPAAAA
AAVVAATKEGQAAEAAPDVDLAPVSKKGLAHPARPGAGTIGRKVMIRANHFLVDVADNNL
FHYDVSINPESKSRATNREVLSELIKLHGRKSLGGKLPAYDGRKSLYTAGSLPFESEEFV
VTLVDPEKKDKERAEREYKITIRIAGRTDLFHLQQFLAGRQRDMPQETIQVLDVVLRESP
SWNYVTVSRSFFSTTFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTV
IQFVQEFLNLRDASRPLNDRDRVKIKKALRGVRVETNHQQDQIRRYKITGITPIPMSQLI
FPVDERGTRMTVVQYFMERYNYRLQYTSWPCLQSGSDSRPVYLPMEACKIVEGQRYSKKL
NDKQVTNILRATCQRPQQREQSIREMVLHNKYAEDKFAQEFGIKVCSDLVSVPARVLPPP
MLRYHESGKEKTCAPSVGQWNMINKKMINGGTIDKWACITFSRMRPEEVHRFCCDLVQMC
NATGMSFCPRPVLDIRTATPNNIENALRDVYRRTAEIEKGKPLQLLIVILPEVSGSYGKI
KKVCETDLGIVSQCCLPRHASRPNKQYLENVALKINVKAGGRNTVLDRAFVRNGIPFVSE
VPTIIFGADVTHPPPGEDSASSIAAVVASMDWPEITKYRGLVSAQPHRQEIIEDLFSVIK
DPQRGITVNGGMIRELLIAFRRRTGRRPERIIFYRDGVSEGQFSHVLLHEMDAIRKACAS
LEEGYLPPVTFVVVQKRHHTRLFPEVHGRREMTDKSGNILPGTVVDLMICHPTEFDFYLC
SHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYARCTRAVSVVPPAYYAHLAAF
RARYYVEGESSDGGSTPGSSGQAAVAREGPVEVRQLPNIKENVKDVMFYC
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcctactgcggcggcggaggcggcggacgaggccgcggcggtggcgaccagcagtac
caggccggttacggtggcgggcgcgctgggccgatgggaggaggaggaccaggacgcggg
ggcggcggagggcgcgcgcccaccggcttcgtctggccgcctccgggcgcgtcgacgccg
cgtccggtgcaggtcccggtgcctgtcccgtacggtggccagcccgcgacggtcgtgtac
cgcaaccctgccgcgacggggccgcaccagggcgtctaccagcacggcgtcgtcttccgc
ggccccgccccgacgccaccggctccggcttaccccttcgccccggcgccggtcaccatc
cgcgcgccatctcctccgccctcgcccagcgcggcccccttccagccggcccgcgtgtcg
gcaccgcctccgactccagccgccgcgcccgctgcgccatcggcggcgtccgtcgccaag
gagctcgagcagaagctcttcgtctccgagaccgcgctcgcgccgcccgcggccgcggcg
gcggcagtggtcgcggccacgaaggaagggcaggcggcggaggcggcccccgacgtcgac
ctcgcgccggtctcgaagaaggggctcgcccaccccgcgcgtcccggcgctggcaccatc
ggcaggaaggtcatgatccgcgcgaaccacttcctcgtcgacgtcgccgacaacaacctc
ttccactacgatgtttctattaatccagagtcaaagtcaagagctacaaacagggaagta
ctcagtgagctgatcaagctgcatgggaggaaatcccttggcggcaagttacctgcttat
gatggaagaaagagtctttatactgcaggttcacttccttttgaatcagaggagtttgtt
gttacactggttgatcctgaaaagaaagataaagaaagggctgaaagagagtataagatc
accattcgtattgctgggagaacagacttgttccaccttcagcagtttctggctggaaga
cagagggatatgcctcaagagaccatccaagtactggatgttgtcctcagggagtcacca
tcttggaactatgtcacagtatcaagatcctttttctctaccacgtttggtcaccgagga
gacattggtgaaggattagagtgctggagaggttactaccagagcctgcggccaacacag
atggggctctccctcaatatagatatatctgcaacatcctttttcaagccagtgacagtg
atccaatttgtgcaagagttcctcaacttacgtgacgcgtcacgccctctgaatgacagg
gaccgtgtgaagataaagaaagcactacgaggagttcgtgttgaaacaaaccaccagcaa
gaccaaatcagaagatacaagataacagggattacacctatccccatgagccagctaata
tttcctgttgacgagagaggaaccaggatgacagttgttcagtacttcatggaaagatac
aactacagactgcaatatacttcttggccctgcctacagtctggaagtgattctcgacct
gtatatttgcctatggaggcatgcaagattgtagaagggcaaaggtactctaagaagcta
aatgacaaacaagtgaccaacattcttagagcgacttgtcaacgtccccagcagagggag
caaagcatacgtgagatggttctgcacaacaagtatgcagaagataagtttgctcaggag
tttggtatcaaggtctgcagtgacctggtctctgtgccagcccgtgtgctgcctccgccc
atgttgagatatcatgagtctggaaaggagaaaacttgtgcgccaagtgttgggcagtgg
aacatgattaacaagaaaatgataaatggagggaccatagacaagtgggcctgtatcacc
ttttcacgtatgcggcctgaggaggtacacaggttctgttgcgatctggttcagatgtgc
aatgccactggaatgtctttctgtccaaggccagttttagatatccgaacagctactccc
aacaacattgagaatgctttgagggatgtatacaggaggactgcagaaattgaaaaggga
aagccgctgcaactgttaattgtcatcctgcctgaagtcagtggttcttatgggaaaatt
aaaaaggtttgtgagactgaccttgggattgtatctcaatgctgcctgccaaggcatgct
tccagaccgaacaagcaatatctggaaaacgttgcactcaaaatcaatgtgaaggccgga
gggcgcaacactgttcttgatagggcttttgttcgaaatgggataccttttgtgtcggaa
gtcccgacaatcatctttggtgctgatgtcacacaccccccacctggagaggactctgca
tcatctattgctgctgtggtggcatcgatggactggccagaaatcacaaagtatagaggt
cttgtctctgctcaaccacacaggcaggagatcatagaagacctctttagtgtcatcaaa
gatccacagaggggaattactgtgaacggtggcatgatcagggagttattaattgccttc
cgtagaaggacaggccgtaggcctgagaggataatcttctacagggatggggtaagtgaa
ggtcaattcagtcatgttctgcttcatgaaatggatgcgatccgaaaggcttgtgcttcc
ttggaggaggggtatctgcccccagtaacctttgtggttgtccagaaaagacaccataca
aggctgttccctgaagttcatgggaggcgtgaaatgactgataagagtggaaatattctt
cctggaactgtggttgacctgatgatttgccaccctactgagtttgatttctacttgtgc
agccatgcaggcattcagggtaccagtaggccaacacattatcatgttctctatgatgag
aatcatttcactgccgatgcacttcagtcactgaccaacaatctttgctacacctatgct
cgttgcactcgtgcagtctctgtggtcccaccggcatactatgcgcaccttgctgcattc
cgtgcgcgctactacgtggaaggagaaagttcagatggtggctcaacccctggcagcagc
gggcaggcagctgtggcccgagagggacctgtggaggtgcgccaactcccaaatatcaag
gaaaacgtcaaggatgtcatgttctactgctga
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integrated database retrieval system
