Brachypodium distachyon (stiff brome): 100829988
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Entry
100829988 CDS
T01717
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100829988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100829988
Spliceosome [BR:
bdi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100829988
Complex C
U4/U6.U5 tri-SnRNP related factors
100829988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
C2H2-zf_KIN17
SNRNP27
zf-C2H2
Vfa1
Motif
Other DBs
NCBI-GeneID:
100829988
NCBI-ProteinID:
XP_003563214
UniProt:
I1GLA5
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Position
1:complement(1981858..1986339)
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AA seq
201 aa
AA seq
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MSGNPTGVDNTFRRKFDKEEYLERARQREQDEKDEARKGKDRGPPVQRQPLKHRDYEVDL
ESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERAS
LEQVQKRFESLKKRKDPGSFSEQDLDERILKQQQEEEERKRQRKEKKKEKKKEQAGQNEP
EDIDPDVAAMMGFGGFGTSKK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaatccaaccggtgttgacaacactttccggaggaaatttgacaaggaggag
tacttggaacgagctcgacagagggagcaggatgagaaggacgaagctcggaaaggcaag
gataggggtcctcctgtgcaaagacaacctttgaaacatagggactatgaagttgacctt
gagtctcgtcttgggaagacccaggtggtaaccccaattgcacctttgagtcagcaggct
ggatactactgttcagtatgtgagtgcgttgttaaagattcagctaattatttggatcat
ataaatggcaagaagcaccagagagcattgggcatgtctatgcgtgttgaaagggcatca
ctcgaacaggttcaaaaaaggttcgagtcacttaagaaaaggaaagatccaggcagcttc
agcgaacaagatttggatgagaggatattgaaacaacagcaagaggaggaggagaggaag
cgtcaacgcaaagaaaagaagaaagagaagaagaaagagcaggctggccagaatgagcct
gaggatattgaccctgatgttgctgctatgatgggttttggagggttcgggacctcgaag
aagtga
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