Brachypodium distachyon (stiff brome): 100830156
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Entry
100830156 CDS
T01717
Name
(RefSeq) probable ubiquitin receptor RAD23
KO
K10839
UV excision repair protein RAD23
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03420
Nucleotide excision repair
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100830156
09124 Replication and repair
03420 Nucleotide excision repair
100830156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bdi03051
]
100830156
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100830156
Proteasome [BR:
bdi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100830156
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100830156
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
Crinkler
Dsc3_N
Ubiquitin_4
TECR_N
Motif
Other DBs
NCBI-GeneID:
100830156
NCBI-ProteinID:
XP_003578094
UniProt:
I1IPZ9
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All DBs
Position
4:35433716..35440082
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AA seq
395 aa
AA seq
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MKVSVKTLKGSSFQIEVNPADKVSDVKKLIESSQGQNVYPADQQMLIHQGTVLKDDTTLE
ESKVLENNFLVIMLRQNKGSSSAAPAKSKEPSNQAPPTQTVPANPPSQAPVVPAPPAAAA
PAPIVPISAPTPTATASPASAVAVSTEAETYGQAASNLVAGGNLEATIQSILEMGGGTWD
RDTVLRALRAAFNNPERAVEYLYSGIPEPMEIPAPPPSAQPADPVQALQATQPAVASSGP
NASPLDLFPQALPNASANAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNP
QILQLIQDNQAEFLRLINEPAEGDEDENLLDQFAEGVPQTIAVTPEENEAILRLEGMGFD
RALVLEVYFACNKDETLAANYLLDHMNEFDDGAPQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctccgtgaagacgctcaagggctccagcttccagatcgaagtgaaccccgcc
gacaaggtttctgatgtgaagaagctcattgagagttcacaagggcagaatgtctaccca
gctgatcaacaaatgcttatacaccaagggacggtgctcaaggatgacactacgttggag
gaaagcaaagttcttgaaaacaacttccttgtgataatgcttagacagaataagggctca
tcaagtgcagctccagctaaatctaaggaaccttcaaatcaggcaccccctactcagaca
gtacctgctaaccctccatctcaagcaccggtggtgccagcacctccagcagctgctgca
ccagcacctattgtacctatcagtgctcctactccaactgccacggcctcgccagcttct
gctgtggctgtctccaccgaagcagaaacttatggtcaggctgcctcaaaccttgttgct
gggggcaacctagaggcaactattcagtcaattcttgaaatgggtggtggaacgtgggac
agagacacagtgctccgtgctctacgggctgcattcaacaatccggagcgggctgttgag
tatttatattctggaattcctgagccgatggagattcctgcaccaccaccaagtgcccag
ccagctgatcctgtccaggctttacaggcaactcaacctgcagttgcctcttctggacca
aatgctagtcccttggacctcttccctcaagcccttccaaatgcttctgcaaatgccgct
ggtgagggaaatctggatgttttgcgtaataatgcacagttccgaagcttactgtcttta
gtgcaggctaacccccaaatcctacagccattgcttcaagagctgggaaaacaaaatcct
cagattttgcagctgattcaggacaaccaagccgagttccttcgtttaatcaatgaacca
gctgagggtgatgaagacgagaatctcctagaccaatttgcagagggagtgcctcagacc
atagcggttactcctgaggagaatgaagctatacttcgtcttgaaggaatgggttttgac
cgggcgcttgttctggaggtgtactttgcctgcaacaaggacgagaccttggccgcgaac
tatctcttagaccatatgaatgagtttgatgatggcgcaccgcagtaa
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