Brachypodium distachyon (stiff brome): 100830516
Help
Entry
100830516 CDS
T01717
Name
(RefSeq) protein argonaute 1A isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100830516
03036 Chromosome and associated proteins [BR:
bdi03036
]
100830516
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100830516
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100830516
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100830516
microRNA pathway
RISC loading complex
100830516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
100830516
NCBI-ProteinID:
XP_003570049
UniProt:
A0A0Q3IJS1
LinkDB
All DBs
Position
3:51944853..51956468
Genome browser
AA seq
1076 aa
AA seq
DB search
MDFQMDNGHYSHQALTMVKNKQYAAISSGESSKTQEATRTPGQGPSQRVERGQQRGGSNR
AHANTQYSQQGGRGGGHYQDPASQQPPGGPVKYQAHGYYGHGGPNQRGMSQPYHDGRRSG
GGGRGVPITPSITLPELHQAPQVQHQVPVVTPSPRETGSSSLGVDMNTGQLQLQFQQLVN
LGQSSSGQGIQLAPPSSKSVRFPMRPGKGKLGNRCIVKANHFSAELPDKDLHQYDVSITP
DVPSRGVNRAVMGQLVTLFRQSHLGGSLPAYDGRKSLYTAGPLPFTSRTFEIILQDEEDR
LGGAQAAQRREKHFTVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTARY
SPVARSFYSPNLGRRQQLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFV
AQLLNRNVSVRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPID
NHGTVKTVVRYFQETYGFNIQHTTLPCLQVGNPQRPNYLPMEVCKIIEGQRYSKRLNEKQ
ITALLKVTCQRPQQRELDILQTVNHNAYHEDPYAQEFGIRIDKKLASVEARILPPPRLKY
HDSGREKDVLPRIGQWNMKNKKMVNGGRVKDWTCINFSRHVQDSAAKSFCHELAVMCQIS
GMEFSIDPLLPPLTARPEHVERALKARYQDSMTVLKPQGRELDLLIVILPDNNGSLYGDL
KRICETDLGLVSQCCLTKHVFKMNQQYLANVALKINVKVGGRNTVLVNALSRRIPLVSDR
PTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQTRRQELIQDLFKVQQD
PQRGSIAGGMVRELLISFKRSTGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
PNYQPPVTFVVVQKRHHTRLFANNHNDQHSVDRKSGNILPGTVVDSKICHPTEFDFYLCS
HAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFR
ARFYLEPDTSDSGSAMSGATTSRGPASARSNRAAGNVAVKPLPDLKDNVKRVMFYC
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggacttccaaatggacaacggacactactcgcatcaagctttaactatggtgaaaaat
aaacaatatgctgccattagctccggggaaagttccaaaactcaggaagctacaagaacc
cctggacagggcccttcacagagagttgagagaggtcagcagcgtggaggtagcaaccgg
gcacatgccaatactcaatattctcaacaaggaggtcgtggtggtgggcattaccaggat
ccagcatcacagcaaccacctgggggtcctgttaagtatcaagcacatgggtattatggc
cacggtggcccaaaccaaagaggaatgtcacaaccataccatgacgggcgtaggagtggc
ggtggtggaagaggagttcctattactccatcaataacacttcccgaactgcaccaagcc
ccacaagttcagcaccaagttcctgtggttactccttcaccgcgggaaactggctcatcc
tcactaggtgttgatatgaacactggacaactccagctacagtttcagcaacttgttaac
ctaggtcaaagttcctctggacagggtatccaattagcaccaccatcgagtaaatctgta
agatttccaatgcgccctggcaagggtaaattaggcaataggtgcatcgtgaaagcaaat
catttctctgctgaactgcctgataaagatcttcatcaatatgatgtctctataactccc
gacgtcccttcacgtggtgtcaatcgtgcagtcatggggcagcttgtaaccctcttcagg
caatctcatttgggtggtagtcttcctgcctatgatggaaggaagagcctatatactgct
gggccattgccattcacttctaggacctttgaaattattcttcaggatgaggaggataga
cttggtggtgcgcaagctgcacaaaggcgtgaaaaacattttacggtcgtcataaagttc
gcggcgcgcgctgatctccatcatttagctatgtttttggctgggaggcaagcagatgct
cctcaagaagctcttcaagtgcttgacatcgttctacgtgaactgcctacagcaaggtat
tccccagttgccaggtcattttattcacctaacttagggaggcgccagcaactcggtgat
ggcttggaaagttggcgtggcttttaccagagcatacggcccacacagatgggactttca
ctgaatattgatatgtcatctacagcattcatcgagcctttgcctgtgattgattttgtt
gcacaacttttgaacagaaacgtatcagttagaccattatcagatgctgatcgggtgaag
atcaagaaggctctacgaggtgtaaaggttgaggtcacacatagaggcaatatgcgcaga
aagtatcgtatatctggccttacctcgcaagcaacaagagagttaactttccctatagat
aatcatggtactgtgaagacagtagtgcgatacttccaggagacatacggttttaacatt
cagcatactactttgccttgcttgcaagtgggcaatccacagaggccaaattaccttccc
atggaggtctgtaagattatcgagggacagcgttactcaaaacgactgaatgagaagcag
ataactgctcttcttaaagtgacctgccagcgcccccaacagagggagctggacattttg
cagacagtgaatcacaatgcataccatgaggatccatatgcgcaggagtttggtataagg
attgataagaaacttgcatcagttgaagctcgtatcttacctccccctagacttaaatac
cacgatagtggcagagagaaagatgtattaccaagaattggccaatggaatatgaagaat
aagaaaatggtcaatggtgggagagtgaaggactggacatgcattaacttttcacgacat
gtccaagatagtgcagcaaagagtttctgtcatgagttggctgtcatgtgccaaatatct
gggatggagttttcaatcgatcctctgcttcctcctttaactgcgagacctgaacatgta
gaaagagcactcaaggcacgctatcaagattccatgactgtgttgaaaccacagggcagg
gaacttgacctgcttattgtaattttacctgacaataatggttctctttatggtgatctc
aaaagaatatgtgagacagatcttggattggtctctcaatgctgtctcacgaaacatgtt
tttaagatgaaccagcagtatcttgcaaatgtcgcccttaaaatcaatgttaaggtggga
ggaagaaatactgtacttgtcaatgctttgtcaaggagaattccccttgtcagtgacaga
ccaaccattatattcggtgcagatgttacccatcctcatcctggagaggattctagccct
tccattgcagctgttgttgcttctcaagattggcctgagatcaccaagtatgctggatta
gtgagtgcacaaacccgtcgccaggagttgatacaagatctttttaaagtgcagcaagat
cctcagagagggagtatagctggtggaatggttagagaacttctcatttcttttaagaga
tcaactggacagaaaccccagaggatcatattctatagagatggtgttagtgaagggcag
ttctatcaggttctgttgtatgagcttgatgccattagaaaggcttgtgcatcattggag
cccaattatcagccacctgttacctttgtggtggtccagaagcgtcatcatacacggctc
tttgctaataaccacaatgatcagcacagtgttgatagaaaaagtggaaacatattacct
ggaactgtggttgattcaaagatatgtcatcctaccgagtttgatttctacctttgtagc
catgctggcattcagggaacaagccgccctgcgcattaccatgtcctgtgggatgaaaac
aaatttactgccgacggtttgcagactctcacgaacaacttgtgctacacctatgcaaga
tgcactcgttctgtatcaattgtgcctcctgcatactatgctcatcttgcggcttttcga
gctcggttctacttggaaccggatacttccgacagtgggtcggccatgagtggtgccacg
acaagccgtggccctgctagtgcgcgcagcaatagagctgctgggaacgttgctgttaaa
ccgctgcctgacctaaaggacaacgtgaagcgtgtcatgttttactgttaa
DBGET
integrated database retrieval system
