Brachypodium distachyon (stiff brome): 100830670
Help
Entry
100830670 CDS
T01717
Name
(RefSeq) heat stress transcription factor A-2a isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100830670
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
100830670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7739
APG6_N
Motif
Other DBs
NCBI-GeneID:
100830670
NCBI-ProteinID:
XP_003559435
UniProt:
A0A0Q3KQ67
LinkDB
All DBs
Position
1:6280842..6283468
Genome browser
AA seq
385 aa
AA seq
DB search
MYPFSGIVKEEEFDFAGAYYAAEDGGSPSSWAAGAGASELPRPMDGLGEAGPTPFLTKTY
DVVSDHSTDTVVSWSVAGNSFVVWDAHAFSRVLLPRYFKHGNFSSFVRQLNTYGFRKVDP
DRWEFAAEGFLRGQKELLKTIRRRRPLSSSSSAQQQQQQGAAAGCLEVGQFGHEGEVHRL
KRDKGVLISEVVKLRQEQQATRAQMQAMEARIVATEQKQQQMTVFLARAMKSPGFLQMLI
DRQQGQGPQGHLGPGQAQLRRELEDALSKKRRRPIDYLLPRNGDTSAASYSAAAAAAAAR
DYVPGLADGHARAEDGRSGGGEDTESFWMELLSLGLEEKQGGGAGGGSGSGEGGGAETDN
EVDDEVDVLVQSLYHLSPGGAHNAE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgttcagcggcattgtgaaagaggaggaattcgacttcgcgggagcttactac
gcagcggaagatggcggctcgccgtcttcctgggccgccggcgccggcgcatcggagctt
ccccggccgatggacgggctcggcgaggccgggccgacgccgttcctgaccaagacgtac
gacgtggtgtccgaccacagcacggacaccgtcgtgtcgtggagcgtcgccggcaacagc
ttcgtggtgtgggacgcccacgccttctccagggtgctcctcccgcgctacttcaagcac
ggcaacttctccagcttcgtccgccagctcaacacctatgggttcaggaaggttgatccg
gacaggtgggagttcgcggcagaggggttcctgcggggccagaaggagctcctgaagacg
atcaggcggcggcggccattgtcgtcttcgtcgtcggcacaacagcagcagcagcagggg
gcggcggcggggtgtctggaggtggggcagttcgggcacgaaggcgaggtgcaccggctg
aagcgggacaagggcgtcctgatctccgaggtggtgaagctgcggcaggagcagcaggcg
acccgcgcgcagatgcaggccatggaggcccgcatcgtcgccacggagcagaagcagcag
cagatgacggtcttcctggcgcgcgccatgaagagccccggcttcctccagatgctcatt
gaccgccaacagggccaaggcccacagggccacctgggcccgggccaggcccagctgcgg
agggagctcgaggacgcgctctccaagaagcgccgccggcccatcgattacctcctcccc
cgcaacggcgataccagcgccgcaagttacagcgccgcggcggcggccgctgcagcacgt
gattacgttcccggacttgccgacggccatgcgagggcggaggacggccgaagcggcggc
ggggaggacaccgagagcttctggatggagctgctgagcctcggcctggaggagaagcag
ggaggaggagcagggggcggcagcggcagcggggaagggggcggcgccgagacggacaac
gaggtggacgacgaggtggacgtgctcgtgcagagcctgtaccacctcagccccggcgga
gcccacaacgcagagtga
DBGET
integrated database retrieval system
