Brachypodium distachyon (stiff brome): 100830911
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Entry
100830911 CDS
T01717
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100830911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bdi04040
]
100830911
Ion channels [BR:
bdi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100830911
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100830911
NCBI-ProteinID:
XP_010227871
UniProt:
A0A0Q3K3S3
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All DBs
Position
1:44953310..44965816
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AA seq
782 aa
AA seq
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MSGEEKDDVPMLQRALELQRLPARSSSMCIPVRDGTYEDSFISHTGPLFVRRPTQFASMG
IPSGSRDVPDKISWPFQGKQGKKTNAVMPADIGTSDYCDGRHAPKNEHLMMSGPLGQCDD
PDCVHCPPACKNKRHFQRTSAPFDNKFHKILYGFGGWRTKIGRSLSYIPVVNPHAKAVHR
WNQFFVISCLLAIFTDPLFFFLLSVDKDNKCIVFNWNFARALAVARTVTDVIYLLHMLLQ
FRLAYVAPESRVVGTGDLVDEPKKIAMRYLRGFLAFDLFVVLPLPQVMILRVIPKYVGVS
SANYAKNLLRATVLLQYAPRIIRFVPLLGVQSANGFIFESAWANFVINLLMFVLAGHVVG
SCWYLFGLQRVNQCLQNVCVGLSITSCAEFIDCGNGIAEQGRQKRHMWFHKFNDSASVEC
FDTANGSFKYGIYQQAVLLTAEPAVKRYIYSLFWGFQQISTLAGNLVPSYFAWEVIFTMA
IIGLGLLLFALLIGHMQNFLQALGRRRLEMQLRRRDVEQWMSHRRLPEHLRRFCILGIKS
EKPTLFPCFPFEHWRVRDAERFSWVATRGVNEEELLSNLPEDIQRAIRRHFFRFLDKVRL
FNLMMDCAIWDAICDKLKQNLYIRGSDILYQGGPVEKMVFIVRGKLESISADGTKSPLHE
GDVCGEELLTWYLEQQSSATRDGGKVKVYGMRPVAIRTVRCVSNVEAFVLRASDLEEVTS
QFSRFLRNPRVLGAIRYESPYWRTIAASRIQVAWRYRKRRLKRAEVSRSQQPSYGLYSNV
QL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgaggagaaagatgatgtccctatgctccaaagagctttggagttacagaga
cttcctgctagaagttcatcaatgtgtataccagtcagagatggtacatatgaagactcg
ttcatatcccatactggtcctctgttcgttcggagaccaactcaatttgcatccatgggc
attccatcaggaagcagagatgtgccagacaagatatcgtggcctttccagggtaagcaa
ggaaagaagacaaatgctgtcatgcccgcagatattggaacgagtgactattgtgatggt
aggcatgcaccaaagaatgaacacttgatgatgtctggacctctgggacagtgtgatgat
cctgattgtgtacattgccctcctgcctgtaaaaacaaaaggcatttccagagaacttca
gctccttttgataataagtttcacaaaattctgtatggttttggtggatggaggacaaaa
attgggcgttccctttcatatatcccagttgtgaatccacatgctaaggctgttcatcga
tggaaccagttttttgtgatatcatgcttgcttgccattttcaccgaccctctgtttttc
ttcctattgtccgtggataaggataacaagtgcatagtgttcaactggaattttgcgaga
gcattagctgtcgcaagaactgtgactgatgtcatttatcttcttcacatgcttcttcag
tttaggctggcctatgtagctccagagtccagagtagtgggaactggagatttagttgac
gagcctaaaaaaattgctatgcgctatcttcgtgggtttcttgcattcgacttattcgtt
gtgcttccactccctcaggtgatgatattgcgagttatccctaagtatgtgggggtatca
agcgcaaattacgcaaagaatttgttgcgtgccacagttcttcttcagtatgccccacgt
attatcagatttgtgccattgcttggtgttcaatctgccaatggattcatttttgaatca
gcatgggcaaactttgtaattaatcttctaatgtttgttttagccgggcatgttgttggt
tcatgttggtacctctttgggctacagagggttaatcaatgtctacagaatgtctgtgtt
gggttgagcataacatcatgtgctgagttcatagattgcggaaatggcattgctgagcag
ggcagacaaaagaggcacatgtggttccacaagttcaacgactcagcctcagtagagtgt
ttcgatactgcaaatggttcttttaagtatgggatctatcaacaggcagttttgctaact
gcagaacctgccgttaagcgctatatatattcattattttggggatttcagcaaataagt
actttagctggcaatttggtcccaagttactttgcatgggaagttatattcactatggct
attattggactggggttgttgctttttgcattacttattgggcatatgcagaactttctc
caagctcttggaagaaggagactggaaatgcaacttagaaggcgtgatgttgaacaatgg
atgagccacaggcgactgccagaacatttgagaaggttttgcatcctaggaatcaaatct
gagaaaccaactttgtttccatgttttccttttgaacactggagggttagagatgcagag
aggtttagttgggtggctacgagaggagtgaatgaagaagagcttttgagtaatctacca
gaagatattcaaagggctatacgccgccatttttttaggttcctcgacaaggtccgctta
ttcaatctgatgatggattgtgcaatctgggatgctatctgtgataagttaaagcagaac
ttgtatattagaggaagcgacattctttatcagggtggccctgtggaaaagatggtcttt
atagtgaggggtaaactggaaagcatcagtgctgatgggaccaagtctccactgcatgaa
ggagatgtatgtggtgaggagctccttacttggtacttggagcagcagtcttcagcgact
agagatggtgggaaggtgaaggtctatggcatgcgaccggtggccatacgtactgtcaga
tgtgtatcaaatgttgaagcttttgtgctacgggcaagtgatttggaagaagtaacttct
caattttcaagattcttgcgcaatcctcgggtgcttggtgcaattaggtacgaatcacca
tactggaggactatcgcggcgagccgcatccaggtcgcttggaggtaccggaaaaggcgg
ctgaagagagcagaggtgtcgaggtcgcagcagccatcgtatggcttatattccaatgta
cagctgtga
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