Brachypodium distachyon (stiff brome): 100830976
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Entry
100830976 CDS
T01717
Name
(RefSeq) cyclic nucleotide-gated ion channel 2 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100830976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bdi04040
]
100830976
Ion channels [BR:
bdi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100830976
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100830976
NCBI-ProteinID:
XP_010229614
UniProt:
I1GN39
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Position
1:complement(5669820..5674992)
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AA seq
732 aa
AA seq
DB search
MPSLSFLRSLSESRRLLVQARDGVKRTLGSCGAGQDGDEESQAGRGVASSSLPAAAMAGP
PGECYACTQPGVPAFHSTTCDQVHSPDWDADAGSSLVPVQSQQAHPAAGAGAVAAARWLF
GPVLDPRSKRVQRWNRWILLGRAAALAVDPLFFYALSIGRAGRPCMYMDAGLAAAVTALR
TCADLGHLAHVLVQFRLAYVSRESLVVGCGKLVWDPRAIAANYARSLKGLWFDLFVILPI
PQIIFWLVIPKLIREEQVKVIMTILLLIFVLQFLPKVYHSIHIMRKMQKVTGYIFGTVWW
GFGLNLFAYFIASHIAGGCWYVLAIQRVASCLQAECKKNNNCNLMSLACSKEMCFHFPWS
SDMSGLACDTNLTSFGQQNVPTCLSGNGAYAYGIYKGALPVISSNSLAVKILYPIFWGLM
TLSTFGNDLEPTSNWLEVIFSIINVLSGLMLFTLLIGNIQVFLHAVLARKRKMQLRFRDM
EWWMRRRQLPSRLRQRVRKYERERWAAITGDEEMEMIKDLPEGLRRDIKRYLCLELVKQV
PLFHGMDELILDNICDRLRPLVFCSGEKVIREGDPVQRMVFILQGKLRSTQPLTKGVVAT
CVLGAGSFLGDELLSWCLRRPFVDRLPASSATFECVEAAQAFCLDAPDLRYITEHFRYKF
ANDKLKRTARYYSSNWRTWAAVNVQLAWRRYRARTMATAVLPPPGMGPEDGDRRLRHYAA
MFMSLRPHDHLE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccttccctctccttcctccgctccctctccgaaagtagaaggttgctcgtgcaggcg
cgcgatggggtcaagcggacgctgggctcgtgcggcgcggggcaggacggggatgaggag
tcccaggccggaaggggcgtcgcgtcgagcagcctgcctgcggcggcgatggcgggtccc
ccgggcgagtgctacgcgtgcacgcagcccggggtgccggcgttccactccacgacgtgc
gaccaggtgcactcgcccgactgggacgccgacgccggctcgtcgctagtgcccgtccag
tcgcagcaggcccacccggcggcgggtgcgggggccgtggccgccgcgcggtggctgttc
ggccccgtgctcgacccgcggagcaagcgcgtgcagcgctggaaccgctggatcctgctg
ggccgggccgcggccctggcggtggacccgctcttcttctacgcgctctccatcggccgc
gcgggccggccgtgcatgtacatggacgccggcctcgccgccgccgtcacggcgctgcgg
acctgcgccgacctggggcacctcgcccacgtcctcgtccagttccgcctcgcctacgtc
tcccgcgagtccctcgtcgtcggctgcggcaagctcgtctgggacccgcgcgccatcgcc
gcgaactacgcccgctccctcaagggcctctggttcgacctcttcgttatcctcccaatc
cctcagatcatcttttggctggtcataccaaagttaatcagagaagagcaagttaaagtt
atcatgacaatactactgctcatattcgttttgcaatttctccccaaggtgtatcatagt
attcatatcatgaggaaaatgcagaaggtgacaggttacatctttggaacagtatggtgg
ggatttggtctaaatctttttgcctatttcattgcttctcatattgcaggtgggtgttgg
tatgttcttgcgattcagcgtgttgcctcctgcctccaagcggaatgcaagaaaaacaat
aattgcaatttaatgtcactggcctgctccaaggaaatgtgttttcactttccttggtca
tcagatatgagtggattagcatgtgacacgaacttaacttcctttgggcaacaaaacgtg
ccgacctgtctaagtggcaatggcgcctatgcttatggaatctacaagggagctcttcct
gttatctcgagcaattcacttgctgtcaaaattctctatcctatattttggggcctcatg
acactcagtacttttggcaatgatcttgagccgacgagcaattggcttgaggtgatattc
agcatcatcaatgtgctcagtgggctgatgctcttcaccttactgattggaaacatacag
gtcttcttgcacgctgtcttggcgaggaagcggaagatgcaactgcggttccgggacatg
gaatggtggatgaggaggaggcaactgccgtcccggctgcggcagagggtccggaagtac
gagcgcgagcgctgggcggccatcaccggagacgaggagatggagatgatcaaggacctg
cccgaagggctccggcgagacatcaagcgctacctctgcctcgagctggttaaacaggtt
cctctgttccatggcatggacgagctcatcctggacaacatctgcgacaggctgcggccg
ctggtgttctgcagcggcgagaaggtgatccgggagggcgacccggtgcagcgcatggtg
ttcatcctgcaggggaagctccggagcacgcagccgctgaccaagggcgtggtggcgacg
tgcgtgctgggcgccggcagcttcctgggcgacgagctcctctcctggtgcctgcggcgg
ccgttcgtggaccggctgccggcgtcctcggccacgttcgagtgcgtggaggcggcgcag
gccttctgcctggacgcccctgacctgcgctacatcacggagcacttccggtacaagttc
gccaacgacaagctcaagcgcaccgcaaggtactactcgtccaactggcggacgtgggcc
gccgtcaacgtgcagctcgcgtggcggaggtacagggccaggacgatggccacggcggtg
ctcccgccgcccggcatgggccccgaggacggggaccgccggctccgccattacgcagcc
atgttcatgtcgctcaggccgcacgaccacctcgagtag
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