KEGG   Brachypodium distachyon (stiff brome): 100831046
Entry
100831046         CDS       T01717                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A0
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100831046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100831046
   03041 Spliceosome [BR:bdi03041]
    100831046
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100831046
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100831046
Spliceosome [BR:bdi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100831046
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 100831046
NCBI-ProteinID: XP_003571746
UniProt: I1HYU9
LinkDB
Position
3:6561718..6565586
AA seq 403 aa
MAGYPEDNQHALNGYEEEEEVEEVEEVDEEEGHPGRRGRRDGGDGGGYGDVGGDDGRAGG
GDSSGKIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVID
KVLEDEHNIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPASLSEDDLRDHFSSYGKV
VEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHS
SNGRSSHAGGGYRSSYRSGASGGGSSSGGSVGGGSYGGGHRSAAAGSYYDSTGYGYGRGG
YGAYGGNAAFGSGFGGGYGGSMYGGAYGAYGAYGGGAYGGGAYGGGAYGGGAYGAGAYGG
GAYGGAPGGGYGTGGYGSYGGAGGAAGGSAGGRGSSRYHPYGK
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcggggtacccggaggacaaccagcacgccctgaacgggtacgaagaggaggaggag
gtcgaagaagtggaggaggtcgacgaggaggagggccaccctgggaggaggggccgacga
gatgggggcgatggcggtggctatggtgacgtcgggggggatgacggcagggccgggggc
ggtgactcgtctgggaagattttcgtcggcggtgtggcttgggagaccactgaagaaaca
ttctccaagcattttgggaagtatggggcaataactgattctgtaattatgaaggacaag
catactaagatgcctcgtggatttggatttgttacattttctgatccatctgttatagac
aaggttttggaggatgaacacaatatagatggaagaacggttgaagtcaaaaggacagtc
ccgagggaagagatgtcgtcaaaagatggccccaagacaagaaagatctttgttggcggg
ctaccggcatcgctaagtgaagatgatttgagggatcacttctcctcatatggtaaggtg
gttgaacatcagataatggttgatcatagcactgggcgttcaaggggttttggttttgtc
acttttgaaagtgaggattctgttgaaagggtcatatcagagggaagaatgcgtgatctt
ggcgggaagcaggttgaaataaagaaggctgaaccaaagaaacatgggggtgatcacagt
agtaacgggagatctagtcatgcaggtggtggttatcgtagttcttaccgtagtggagct
tctggtggtggtagcagcagcggtggcagtgttggtgggggcagctatggcggtggtcat
cgatctgctgctgcgggaagttactatgatagcacgggatatggttatggtagaggaggc
tatggtgcctatggaggcaatgctgcttttgggtctggttttggtggtggttatggtggc
tctatgtacggaggtgcttatggcgcatatggtgcctatggaggcggtgcttacggaggt
ggtgcctatggaggtggtgcttacggaggtggtgcctatggtgctggtgcatatggaggt
ggagcttacggtggtgccccaggtggtggctatggcaccggaggatacggtagttatggg
ggtgcaggtggtgctgctggtgggagtgcaggtgggcggggttctagcaggtaccatcct
tatgggaaatga

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