Brachypodium distachyon (stiff brome): 100831111
Help
Entry
100831111 CDS
T01717
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00040
Pentose and glucuronate interconversions
bdi01100
Metabolic pathways
Module
bdi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100831111
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
100831111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
100831111
NCBI-ProteinID:
XP_003563632
UniProt:
I1GXC2
LinkDB
All DBs
Position
1:31911108..31912975
Genome browser
AA seq
412 aa
AA seq
DB search
MAFRNDAIRAFFLLMVVSAAYAKAAEKEAAGSAAAASGPGATLDIVKLGATGDGKTDSTK
AVEEAWASACGGTGKQTILIPKGDFLTGPLNFTGPCTGDITIQVDGNLLGSNDLAKYKAN
WIEIMRVKNLVITGKGKLDGQGPAVWGKNSCAKNYNCKILPNTLVLDFCNNTLIEGITLL
NSKFFHLNIYECRGITVKDVTITSPGDSPNTDGIHMGDASNITITDTKIGTGDDCISIGP
GTSGVNISGVNCGPGHGISVGSLGRYKDEKDVTDITVKNCVLNKSTNGVRIKSYEDAKSP
LVASKLTYENIKMMDVGYPIIIDQKYCPNKICPPKPNSAKVTVKDVTFRNITGTSSTPEA
VSLLCSDKQPCSGVQMFDVKVEYSGTNNKTMAVCTNAKVTAKGCSEALACAA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaggaacgatgcgatcagagccttcttccttctgatggttgtgagcgcggcg
tacgctaaagcggcagagaaggaggccgctggatcggcggcggcggcgtccgggcctggc
gcgaccctcgacatcgtcaagctcggcgcgaccggggacggcaagacggacagcaccaag
gcggtggaggaggcatgggcgtcggcgtgcgggggcaccgggaagcagacgatcctgatt
cccaagggcgacttcctgaccggacctctcaacttcacggggccgtgcacgggcgacatc
accatccaggtggacggcaacctgctgggctccaacgatctggcaaagtacaaggctaac
tggatcgagatcatgcgcgtcaagaacctcgtcatcaccggcaagggcaagctcgacggc
cagggccccgccgtatggggcaagaacagctgcgccaagaactacaactgcaagatcttg
cccaacacgttggtgcttgacttctgcaacaacacgctgatcgaaggcatcactctgctc
aactccaagttcttccatttgaacatctacgaatgcaggggcatcacggtgaaggacgtg
accatcacctcgccgggggacagccccaacacggacggcatccacatgggcgacgcctcc
aacatcaccatcaccgacaccaagatcggcaccggcgacgactgcatctccatcggcccc
ggcaccagcggcgtcaacatcagcggcgtcaactgcgggccgggccacggcatcagcgtg
ggcagcctgggccggtacaaggacgagaaggacgtgaccgacatcaccgtcaagaactgc
gtgctcaacaagtccaccaacggcgtccggatcaagtcgtatgaggacgcaaagtcgccg
ctggtggcgtccaagctcacctacgagaacatcaagatgatggacgtcgggtaccccatc
atcatcgaccagaagtactgccccaacaagatctgccctcccaagcctaactccgccaag
gtcaccgtcaaggatgtcacgttccggaacatcaccggcacctcctccacgcccgaggcc
gtcagcctgctctgctccgacaagcagccctgcagcggcgtccagatgttcgacgtcaag
gtcgaatacagcggcacgaacaacaagaccatggccgtctgcaccaacgcaaaggtcacc
gccaagggatgcagcgaggcgctcgcatgcgccgcttga
DBGET
integrated database retrieval system