Brachypodium distachyon (stiff brome): 100831199
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Entry
100831199 CDS
T01717
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100831199
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bdi04812
]
100831199
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100831199
Cytoskeleton proteins [BR:
bdi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100831199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
TTI1
Adaptin_N
Cnd1
PDS5
MMS19_C
ParcG
UTP20
Sec7-like_HDS
V-ATPase_H_N
INTS1_R4
MMS19_N
TPR_TTI1_C
RRN3
Dopey_N
Motif
Other DBs
NCBI-GeneID:
100831199
NCBI-ProteinID:
XP_003580101
UniProt:
I1IZG8
LinkDB
All DBs
Position
5:complement(18678896..18691029)
Genome browser
AA seq
1439 aa
AA seq
DB search
MEAALEAARAKDTKERLAGVERLHEALEAAARRGLTSAEVTALVDTCMDLTRDANFRVAQ
GGLQALSAAAVVAGDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLITLMEISSPTIIV
ERAGSYAWAHKSWRVREEFVLTVATAVGLFASTELLMQRVLLSPVLQLMNDSNQSVREAA
ISCIEEMYKNMGSQFHEELQRHNLPPYMLKEINSRLDRIEPQVPSSDGAATKYKVAESRS
LSVNPKRGSPKTKNTARESTLFGGDTDITEKPVEPIRVHSEKELLREFEKIAATLVPEKD
WSVRIAAMQRIEALVYGGAIDYPSFLMLLKQLVPPLSTQLSDRRSTIVKQACHLLNVLSK
ELLGDFEPCAEQFIPMLFKLVVITVLVIAESADTCIKTILRNCKVARILPRVADTAKNDR
SAVLRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRATARTCYRMFTK
TWPERSRRLFMLFDPAIQRTINDEDGVHKRYASPSLRERVVQPSRATSHASGTHIPGYGT
SAIVAMDKSAAISSDPSLSLNNLRLSQSKTSSRISERSLESVLSSSKEKVSAIESLLKGV
SISDRQNFSVARSTSLDLGVDPPSSRDPPIPLAAPASNHVSLQNSGLVDSTISSTRNGGS
RLLDAMATQLGTKERSKSPYLSNVSSESTTGLSLPYLRRSSERLQDGGRMDESNDIRSTR
RFPQMHMEKNYVDVPYRDAAAHRDSHNSNVPNFQRPLLRKQVMSRASASGRHSFDDSQVP
SGDVARYTDTLASLHDALSEGLNPSSDWVARVSAFDFIRNVLQQGQKGIQEILQNFEKVM
KLFFRHLDDPHHKVAQAAFSTLAEIIPACKKPFESYVERILPHVFSRLIDPKELVKKPCS
LTLEIVGRLYAIDMLLPALVRSLDEQRSPKAKLAVLEFANKSFSKYTVDSEGYSNSGFLK
LWLSKLAPLVNEKNAKLKEASISGIISVYSQFDSTAVLNFILSLSVEEQNLLRRALKQKT
PRIEVDLVNYLQSKKERPRPKSYDQTDFGTSSEDGYAQTLKKSYPFGRYSSSSLDAEGGK
KMNTVQQSTQHNVSMGRTTSDMSIDTSQSLEPATGTEVLLTRTRESKNHTSSIVEDNRSW
TNYPEKTDAALDVETAIGTPRLDFSQFRTPDGHDAVGSATAKGVHEEDMVINLSSIKTNP
LADNMLSIPQLLHQISNDTEVSTVEKHAALQQLIKASLGNDSSIWSKYFNQILTSVLEVL
GDSDSSTRELALSLVAEMLNNQKDAMEESIEIVFEKLLHLTKDVVAKISNEANRCINVLL
AKYDPFRCLAVVAPFFVSDDEKMLVVCINCLTKLVGHLSQEELINQLPAFLPALFDAFSN
QSPDVRKSVVFCLVDIYIMLGKAFVPYLEGLSSTQLRLVTIYANRISQARSGAPIDADQ
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgcgctaaggacaccaaggagcggctggccggggtg
gagcgcctgcatgaggcgctggaagcggcggcgcggcgcgggctcacgtccgccgaggtc
accgcgctggttgacacctgcatggatctgacgcgggacgccaacttccgcgtcgcgcag
ggcgggctgcaggcgctctccgccgccgccgtggtcgccggcgaccactttaagatccac
ctgaacgccctcgtacccgccgccgtagagcgcctcggagacggcaagcagcccgtccgc
gatgccgcgcggcagctactcatcaccctcatggagatttcttcaccaacaatcattgtt
gaaagagctggaagttatgcatgggctcataagagttggagggttcgggaagagttcgta
cttacagtggcaactgcagttgggctttttgcttctacagagcttctcatgcaacgggtt
ttactctcacctgtattgcaattgatgaacgattcgaaccaaagtgttagagaagctgct
atatcttgtattgaggaaatgtacaagaacatgggatctcagttccatgaagagttgcag
cgccataatctgcctccatacatgctaaaagaaataaattcaagattggatagaatagaa
ccacaggttccctcatctgatggtgctgcaacgaaatacaaggttgcagaatctagatct
cttagtgttaatcctaaaagaggcagtccgaagacgaagaacacagcgagggaaagtaca
ttatttggaggtgacacagacataacagaaaaaccagtggaaccaataagagttcactca
gagaaagaattacttcgggagtttgagaagatcgcagctacccttgtcccagaaaaggac
tggtcagtacgtattgctgccatgcaaaggattgaagcactggtctatggaggtgctatt
gattacccgtcatttcttatgctcttgaagcagctggttccaccattgtccactcagcta
tctgatcgacggtctactattgtaaaacaggcatgccatttgcttaatgtactatccaaa
gaactccttggtgactttgagccatgtgctgaacaatttattccaatgctttttaagctt
gtcgtcataaccgtgcttgtcatagctgaatcagcagacacctgcataaaaactatcctg
cgaaactgcaaggttgcacgaattcttcctcgtgtagctgacacagctaaaaatgaccga
agtgcagttcttcgtgctaggtgctgtgaatatgcgcttctaatattggagtattgggct
gacgccccggaaatacaacggtcagctgatttatacgaagatctaataaagtgctgtgta
gcagatgcaatgagtgaggtccgtgcaactgcaaggacttgctacagaatgttcacaaag
acatggcctgagcgctcacgtcgtctttttatgttattcgatcctgctatacagaggaca
ataaatgacgaggatggtgtgcacaaacgttatgcttccccctcgctgcgtgagagggtt
gtgcagccttctcgtgctacatctcatgcaagtggtacacatatacctggatatggcact
tcagctattgttgcaatggacaagagtgcagctatttcttcagatccatctctttcattg
aacaatcttcgtttatcgcagtcaaagacaagcagcagaatttctgaaagaagcctagaa
agtgtgcttagctcaagcaaagaaaaggtttctgctattgaaagtttgctgaaaggtgta
agcatatcagatagacaaaatttctcagttgcacgctcaacaagcttggaccttggggtt
gatcctccatcatctcgtgatcctcctattcctcttgcagcaccagcttcaaaccatgta
tccttgcagaactcagggctcgtggattcaaccatttctagtacacgaaatggaggttcc
cgcttactggatgcaatggcaacacagttaggaaccaaagagcgatcaaagtcaccatat
ttgagtaatgtatcatctgagtccacgacaggcttatcactgccttatttaagaagatct
tcagagaggcttcaagatggaggccgcatggatgagagtaatgatatccgttcaactagg
cgatttccacaaatgcacatggagaaaaactatgttgatgtgccttatagggatgccgcc
gctcacagagattcacacaatagcaatgtcccgaatttccagagacctcttctaagaaaa
caagttatgtcaagggcttctgcaagtggcagacacagctttgatgatagccaagtacca
tctggtgatgtggctagatatacagatactctggcttctttacatgatgcactttctgag
ggtctcaatcctagttcggattgggtagcaagagtctcagctttcgattttatccggaat
gtactgcaacaaggtcagaaaggaattcaagaaattttgcagaattttgaaaaggtcatg
aagctgtttttccgtcatttggatgatcctcatcataaggttgcacaagcggctttttct
acacttgcagagattattccagcttgcaagaagccatttgagagttatgtcgaaagaatt
ttgccacatgtcttttcccgcctaattgatccaaaagagttggtaaaaaaaccatgttcg
ttgactttggagattgttggtcgattatatgctattgatatgctgctacctgccctagta
cgatcactagatgaacagaggtctccaaaggcaaaattggctgttcttgaatttgcaaac
aaatcgttcagcaaatacactgtagattcggaaggttatagtaacagcggcttccttaag
ctatggctttcaaaattggcacctttagtaaatgaaaagaatgcaaaactgaaagaggca
tctatttctggtatcatttcggtgtattctcagtttgattctactgcagtactaaatttt
attttaagtttatcagtcgaagagcaaaaccttttgaggcgggccctgaagcaaaaaaca
ccgcgtattgaggttgatctggtgaactatttgcagagcaagaaagaacgcccccgtcct
aaatcttatgaccagacagattttggaacatcttctgaagatggttatgcacagacattg
aagaagagctatccttttggtcggtattcttctagttcccttgatgctgaagggggaaag
aagatgaatacagtgcaacagtccacacagcataatgtttcgatgggcagaacaacatcc
gatatgagcatagatactagtcaaagcttggaaccggctacaggaactgaagttctttta
actagaactagagaatcaaagaatcatacgagctcaattgtggaagataatcgttcctgg
acaaactatcctgaaaaaactgatgccgccttagatgttgaaactgctattggcactcca
cgcttagatttcagtcaattccgcactcctgatgggcatgatgctgttggctcagcgact
gcaaaaggcgttcatgaggaagatatggttataaaccttagttctataaagaccaaccca
cttgctgacaacatgctgagcataccacaacttcttcatcagataagcaacgatactgaa
gtatcaactgtggaaaagcatgcagccttacaacaattgattaaagcttctctgggtaat
gacagctccatatggtcaaagtacttcaatcaaatactaacgtctgtacttgaggtgctg
ggtgactctgattcatctactagagagcttgctctgtcattagttgctgagatgctcaac
aatcagaaagatgctatggaagaatctattgagattgtttttgaaaaacttctgcacctg
accaaagatgtggtggcaaagatttcaaatgaggcaaaccgatgcataaatgttctgttg
gcaaaatatgatcctttcagatgtcttgctgttgtagcacctttttttgtcagtgatgat
gaaaagatgctcgttgtgtgtatcaactgtttgacaaagcttgttgggcacctttcccag
gaggaattgataaatcaattgcctgcatttttgccagcactgtttgatgcttttagtaac
caaagtccagatgttcgaaagagtgttgtattctgtctggtggatatctacataatgctt
gggaaagcatttgttccatacttggaagggcttagcagcacgcagctgcgcctggtaact
atctacgcaaaccggatttcgcaagcaagatctggcgcgccaattgatgctgaccaatga
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integrated database retrieval system
