Brachypodium distachyon (stiff brome): 100831204
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Entry
100831204 CDS
T01717
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100831204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100831204
03036 Chromosome and associated proteins [BR:
bdi03036
]
100831204
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
100831204
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
100831204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_RIG_1st
Beta-prop_SPT8
RMC1_N
WDR54
Beta-prop_DCAF4
Beta-prop_SCAP
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
100831204
NCBI-ProteinID:
XP_003580440
UniProt:
I1J1D4
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All DBs
Position
5:23540415..23543227
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AA seq
474 aa
AA seq
DB search
MDAGSNSISSEKSSRYAAPRSPLKEAGSRPYMPSLSTASRNPNAKCYGDRFIPNRSAMDM
DMAHYLLTEPKRDEKNVGTASPSNEMYRKLLAEKLLNNRTRILAFQNKPPEPENILTELR
ADTASIQAKPTKQRRHIPQTAERTLDAPDLVDDYYLNLLDWGSSNVLSIALGNTVYLWDG
SNGSTSELVTVDEDNGPVTSVSWAPDGRHIAVGLNSSIVQLWDPSSNRLLRTLRGVHESR
VGSLAWNNNILTTGGMDGKIVNNDVRIRNHAVQTYHGHEQEVCGLKWSGSGQHLASGGND
NLLHIWDVSMASSVQSAGRTQWLHRLDDHLAAVKALAWCPFQSNLLASGGGGSDRCIKLW
NTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHSSR
VLFMTQSPDGCTVASAAADETLRFWNVFGTPDTPKATKVKASHTGMFNSYNHIR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggctccaactcgatctcgtcggagaagagcagccggtacgcggcgccgcgg
tcgccgctcaaggaggccggatccaggccgtacatgccgtcgctgagcacggcgtcccgc
aaccctaacgccaagtgctatggcgacaggttcattccgaacaggtcggcgatggacatg
gacatggcgcactaccttctgacggaaccgaagagggacgagaagaacgtggggacagca
tccccgtccaatgagatgtaccggaaactattggccgagaagctgcttaacaaccgtacc
agaattctggccttccagaacaagccgccggagcctgagaacatcctcacagaactccgt
gctgatacagcttccatccaggcgaagccaacgaagcagcgccgacacatccctcagacc
gcggagaggactctggatgcgccagaccttgttgacgattactacctcaacctactggac
tggggaagcagcaatgtgctgtccattgcgctgggcaacacggtatacctctgggatggc
tcaaatggatctacatctgagctcgttaccgttgatgaggacaatggccctgtcaccagt
gttagctgggctcctgatggccgacacattgctgttggactcaactcgtcaattgtccag
ctctgggatcccagctctaaccgactgctaaggacactgcgaggtgtgcatgagtcgagg
gttggttcactggcgtggaacaacaacatcctgaccactggtgggatggatggcaagatt
gtgaacaatgatgtgaggattaggaaccatgctgtgcagacataccatgggcacgagcag
gaggtgtgtggactcaagtggtcagggtcaggacagcacctggccagtggtggcaacgac
aacctcctccatatatgggatgtgtctatggcatcctctgtacaatctgcaggtcgtacc
caatggctgcacaggcttgatgaccacttggctgcagtgaaggccctcgcatggtgccca
ttccagagcaacctgctggcatctggtggtggcggaagtgaccggtgcatcaagttgtgg
aacacacacaccggcgcatgcctcaactctgtggacaccgggtcgcaagtgtgtgcactg
ctatggaacaagaatgagagagagctgctgagctcacatggattcactcagaatcagctc
actttgtggaagtacccgtcaatggttaagatggctgaactcactggccacagctcccgt
gtccttttcatgactcagagccctgatggttgtactgtagcatctgctgcagcagatgag
accctgcggttctggaatgtgtttgggactcctgatactcctaaggctacgaaagtcaag
gcttctcatactgggatgttcaacagctacaatcatatccgataa
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