Brachypodium distachyon (stiff brome): 100831251
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Entry
100831251 CDS
T01717
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100831251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100831251
04147 Exosome [BR:
bdi04147
]
100831251
04090 CD molecules [BR:
bdi04090
]
100831251
Enzymes [BR:
bdi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100831251
Transporters [BR:
bdi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100831251
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100831251
CD molecules [BR:
bdi04090
]
Proteins
100831251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
RsgA_GTPase
AAA_5
AAA_25
AAA_21
Zeta_toxin
AAA_30
AAA_19
nSTAND1
Rad17
AAA_14
DUF87
DUF6264
Motif
Other DBs
NCBI-GeneID:
100831251
NCBI-ProteinID:
XP_010234205
LinkDB
All DBs
Position
3:11339927..11345705
Genome browser
AA seq
1376 aa
AA seq
DB search
MSSDPDEIKARVVLVDAGAADEWARPELQAFHLPSTSSSHSPQHLFQPQPDAEQSTPAQA
PAANNNASSPPPPRSPLETEQQAPSPSNAAKASGSGDSSSSSKPHPPLPAAALRDLFRFA
DGLDRVLMAVGTLGALVHGCSLPVFLRFFADLVDSFGSHAGDPDTMVRLVSKYALYFLVV
GAAIWASSWAEIACWMWTGERQSARMRVRYLSAALAQDVSFFDADGARTSDVIYAINADA
VVVQDAISEKLGSLIHYMATFVSGFVVGFTAAWQLALVTLAVVPLIAVIGGLTAATMGKL
SSRAQDALSEASNIAEQALAQVRAVQSFVGEERVARAYSAALAVAQRIGYKNGFAKGLGL
GGTYFTVFCCYALLLWYGGRLVRGGHTNGGLAIATMFSVMIGGLALGQSAPSMAAFAKAR
VAAAKLYRIIDHKPATATSEGGVELEAVTGRLELEKVEFAYPSRPEVAVLRGLSLTVPAG
KTVALVGSSGSGKSTVVSLIERFYEPSAGRVTLDGVELKELNLRWLRAQIGLVSQEPALF
ATTIRENLLLGREGEASQVEMEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRI
AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVA
VLGSGVVSESGAHDDLISRGDSGAYANLIRMQEQAHDAAARRSSARPSSARNSVSSPIAM
MQRNSSYGRSPYSRRLSDFSASDFGLSSSVVVMQQHDVHGGGMMKKLAFRAQASSFWRLA
KMNSPELGYALAGSLGSMVCGSMSAVFAYILSAVMSVYYSPDPAHMDREIAKYCYLLIGM
SSAALLFNTVQHLFWDTVGENLTRRVRDAMLGAVLRNEMAWFDAEANASSRVAARLALDA
HNVRSAIGDRISVIVQNSALMLVACTAGFVLQWRLALVLLAVFPLVVAATVLQKMFMKGF
SGDLEGAHARATQIAGEAVANVRTVAAFNSQGKITRLFEANLQVPLRRCFWKGQIAGVGY
GVAQFLLYASYALGLWYAAWLVKHGVSDFSSTIRVFMVLMVSANGAAETLTLAPDFIKGG
RAMQSVFETIDRETEIEPDDPDAAPVPEPEKMRGEVELKHVDFSYPSRPDIQVFRDLSLR
ARAGKTLALVGPSGCGKSTVLSLILRFYDPSSGRVIVDGKDIRKYNLKALRRAVALVPQE
PFLFAGTIHDNIAYGKEGATEAEVVEAAAQANAHKFVSALPDGYKTKVGERGVQLSGGQR
QRIAIARALVKQAAIMLLDEATSALDAESERCVQEALGRASSGRTTVVVAHRLATVRAAH
TIAVIDDGKVAEQGSHAHLLNHHPDGCYARMLQLQRLTPAAGPSSSVAAAATASLS
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgaccccgacgagatcaaggctcgggtcgtcctcgtcgacgccggcgccgcc
gacgagtgggcccgccccgagctccaggccttccatctcccttccacctcctcttcccat
tccccacagcacttgttccaaccacaaccagacgcagagcaatccacgccggcacaggct
ccggcggccaacaacaatgcttccagccctcctcctcctcggtcgccgctggagacagag
cagcaggctcctagtcccagcaatgccgccaaggcctccggctccggcgactcgagctcg
agctcgaagccgcaccctccgttgccggcggcggcgctgcgggacctgttccggttcgcg
gacgggctggaccgcgtgctcatggccgtcggcacgctgggcgcgctggtgcacggctgc
tcgctgcccgtgttccttcgcttcttcgcggacctcgtcgactccttcggctcgcacgcc
ggcgacccggacaccatggtgcgcctggtctccaagtacgcgctctacttcctcgtggtg
ggcgccgccatctgggcctcgtcgtgggccgagatcgcgtgctggatgtggaccggcgag
cggcagtcggcccggatgcgggtccgctacctctccgcggccctggcccaggacgtctcc
ttcttcgacgccgacggcgctcgcacctcggacgtcatctacgccatcaacgcggacgcc
gtggtggtgcaggacgccatcagcgagaagctgggcagcctcatccactacatggccacc
ttcgtctccggcttcgtcgtcggcttcaccgccgcctggcagctcgcgctcgtcacgctc
gccgtcgtgccgctcatcgccgtcatcggcgggctcacggcggccaccatggggaagctc
tcgtcaagggcccaggacgcgctttccgaggccagcaacatcgcggagcaggcgctggcg
caggtgcgcgccgtgcaatccttcgtaggcgaggagcgcgtcgccagggcttactcggcg
gcgctcgccgtggcgcagaggatcgggtacaagaacggcttcgccaaggggctcgggctc
ggtgggacctacttcaccgtgttctgttgctacgccttgctgctctggtacggcgggcgg
ctcgtccgcggtggacacaccaacggtgggctcgccatcgccaccatgttctccgtcatg
atcggcggcctggctctggggcagtcggcgccgagcatggcggcgttcgccaaggctcgg
gtggcggcggcgaagctgtaccggatcatcgaccacaagccggcgacggcgacctcggag
ggcggcgtggagctggaggcggtgacggggcggctggagctggagaaggtggagttcgcg
tacccgtcgcggccggaggtggcggtgctccgggggctgtctctaacggtgccggcgggg
aagacggtggcgctggtggggagctcggggtcggggaagagcacggttgtgtcgctcatc
gagcgcttctacgagcccagcgccgggagggtgacgctggacggcgtcgagctcaaggag
ctcaacctccggtggctgagggcgcagatcgggctggtgagccaggagccggcgctgttc
gccaccaccattagagagaacctgctgctgggcagggaaggggaggcgtcgcaggtggag
atggaggaggccgccagggtcgccaacgcacattccttcatcatcaagctccccgacggc
tacgacacccaggtgggcgagcgcgggcttcagctgtcgggcggtcagaagcagcggatc
gccatcgcccgggcgatgctcaagaacccggcgatcctgctcctggacgaagccaccagc
gcgctggactcggagtcggagaagctggtgcaggaggcgctggaccgcttcatgatcggc
cggaccacgctggtgatcgcgcaccggctctccaccatccgcaaggccgacctggtcgcc
gtcctcggctccggcgtcgtctccgagtccggcgcccacgacgatctcatctcgcggggc
gactccggcgcctacgcgaacctcatccgcatgcaggagcaggcccacgacgccgcggcg
aggcgcagcagcgcgcgcccttccagcgcacgcaactccgtcagctccccgatcgccatg
atgcagcgcaactcctcctatggcaggtccccttactcccgtcgcctctccgacttctcc
gcctccgacttcggcctctcttcctccgtcgtcgtgatgcagcagcacgacgtccatggg
ggcggcatgatgaagaagctggcgttcagggcgcaggcgagctcattctggcggctggcc
aagatgaactccccggagctcgggtacgcgctggcgggttccctgggctccatggtgtgc
ggctccatgagcgccgtcttcgcctacatcctgagcgccgtgatgagcgtctactactcc
cccgacccggcgcacatggaccgggagatcgccaagtactgctacctcctcatcggcatg
tcctccgccgccctgctcttcaacacggtgcagcacctcttctgggacaccgtcggggag
aacctgacgcgccgggtccgcgacgccatgctcggcgccgtgctccggaacgagatggcg
tggttcgacgccgaggccaacgccagctcccgcgtcgccgccaggctcgccctggacgcc
cacaacgtgcgctccgccatcggcgaccggatctccgtcatcgtccagaactcggcgctc
atgctcgtcgcctgcacggcggggttcgtgctccagtggcgcctggcgctcgtgctgctg
gccgtgttccccctcgtggtggccgccactgtgctgcagaagatgttcatgaagggcttc
tcgggggacctggagggggcacacgccagggccacgcagatcgccggggaagccgtggcc
aacgtgcgcaccgtggcggcgttcaactcgcaagggaagatcaccaggctcttcgaggcc
aacctccaggtgccgctgcgaaggtgcttctggaaggggcagatcgccggggtcggctac
ggggtggcgcagttcctgctgtacgcgtcctacgcgctcgggctctggtacgcggcgtgg
ctcgtcaagcacggcgtgtccgacttctccagcaccattagagtcttcatggtgctcatg
gtctccgccaacggcgccgcggagacgctgaccttggcgcctgacttcatcaagggcggc
cgcgcgatgcagtcggtgttcgagacgatcgaccgggagacggagatcgagccggacgac
cccgacgcggcgccggtgccggagccggagaagatgaggggcgaggtggagctcaagcac
gtggacttttcgtacccttcccgcccagacatccaggtcttccgtgacctcagcctccgt
gcccgggccgggaagacgctggccctcgtcggcccaagcggctgcggcaagagcaccgtg
ctgtcgctcatcctgcgcttctacgacccgagctccgggcgggtgatcgtggacgggaag
gacatccgcaagtacaacctcaaggcgctgcggcgggcggtggcgctggtgccgcaggag
ccgttcctcttcgccggcaccatccacgacaacatcgcctacggcaaggaaggcgccacg
gaggcggaggtggtggaggcggcggcgcaggccaacgcgcacaagttcgtgtccgcactg
ccggacgggtacaagaccaaagtcggggagcgcggcgtgcagctctccggcgggcagcgg
cagaggatcgccattgccagggcgctggtgaagcaggcagccatcatgctgctggatgag
gcgacgagtgccctggacgctgagtcggagaggtgcgtgcaggaggcgctcggcagggcg
tccagcgggaggacgacggtggtggtggcgcaccggctggccaccgtcagggccgcgcac
accattgccgtgatcgacgacgggaaggtggcggagcaagggtcgcacgcgcacttgctc
aaccatcaccctgacggatgctatgctaggatgctgcagctgcagaggctcaccccggcc
gccggaccttcctcttctgttgctgctgctgccacggccagcctctcttga
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