Brachypodium distachyon (stiff brome): 100831289
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Entry
100831289 CDS
T01717
Name
(RefSeq) isoamylase 3, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00500
Starch and sucrose metabolism
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100831289
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
100831289
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
ISOA1-3_C
Isoamylase_C
DUF5696
Motif
Other DBs
NCBI-GeneID:
100831289
NCBI-ProteinID:
XP_024310206
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Position
4:complement(38269798..38279525)
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AA seq
783 aa
AA seq
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MGSFLLPVPPHIWMDSVSTNRSPLRSAATAARRSSPSSCSALPNRVGASRFGVAPGCGGR
LFGKAQRFGSVRITTARAQSGNAGKSMTEQRECTMSETLKYSSGKASPLGVSQVEGGLNF
AIFSQHASSVTLCIKVPERGTKDEENAEVVEFALDCQNNKTGDIWHVSVEGLPTSGVLYG
YRVDGPQGWQHGHRFDSNIILLDPYAKLVSGRNYFGVDKEKPSQPFGTYDFDSPPFDWGV
DYRLPNLPETDLVIYEMNVRAFTADESSGVDPAVRGSYLGFIDKIPHLLELGVNAVELLP
VFEFDELEFKRYPNPRDHMVNTWGYSTINFFAPMSRYASAGGGPLAASRELKQMVKALHN
AGIEVILDVVYNHTNEADDANPYVTSFRGIDNKVYYILDPKNNAQLLNFSGCGNTLNCNH
PVVMELVLDSLRHWVKEYHIDGFRFDLASVLCRGTDGSPLDAPPLIKEIAKDSVLSRCKI
IAEPWDCGGLYLVGQFPNWDRWAEWNGKYRDDIRRFIKGDPGMKGVLATRVSGSADLYQV
NKRKPYHGVNFIIAHDGFTLCDLVSYNLKHNDANGESGRDGCNDNFSWNCGVEGETNDSN
VLALRSRQMKNFHLALMISQGTPMMLMGDEYGHTRYGNNNSYGHDTCINNFQWGQLEERR
YGHFRFFSEMIKFRQNHPILKRDRFLNKNDVTWHEDCWENMESKFLAFTIHDHSSGGDIY
LAFNAHDYFVDAVIPPAPQHKRWNRVVDTNLESPNDIVPEGVPFTGSGYRIAPYSSILLK
ANP
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggatccttcctgctacccgtcccaccccacatttggatggattcggtctctacaaat
cgctccccgctgcgctccgccgccaccgccgctcgtcgaagcagcccgtccagctgctcc
gcgcttccgaaccgtgtgggagcgagcaggttcggggtcgcgcctgggtgcggaggacgg
ctatttggaaaggcgcagcgatttgggtccgttcggattaccacggcgagagcacagagc
gggaatgctgggaaaagtatgaccgagcaaagggaatgcacaatgtcagaaaccctgaaa
tattcttctggtaaagcatccccactaggagtgtcgcaagttgaaggtggtctgaacttc
gcaattttctctcagcacgcttcttccgtcaccctctgcatcaaggttcctgagagaggc
accaaggatgaagaaaatgcagaagttgtggagtttgctttagactgccagaacaacaaa
actggagatatatggcatgtgtcagtggaggggttgcctacttctggagttctctatgga
tatcgtgttgatggtcctcaaggatggcaacatggccatagatttgatagcaacattatt
cttcttgatccttatgcgaaattagtctctggtcgaaattactttggggttgacaaagag
aagccaagtcagccttttggaacatatgattttgatagccctccttttgactggggtgtt
gattaccggcttccaaatttgcctgagacagatctagttatatatgaaatgaatgttcgc
gcattcactgcggatgaatcaagtggggttgatccagctgtccgtggaagctatcttggc
tttatcgacaaaatcccacatttgctggaacttggagttaatgcagtggaattacttcct
gtttttgagtttgatgaactggaattcaagaggtacccaaacccaagggaccacatggtc
aatacatggggttattctacaataaacttctttgctcccatgagccgctatgcaagtgct
ggtggtggaccactggctgcttccagagagctcaagcagatggtcaaagcactgcataat
gctgggatagaggttattctggacgttgtttacaatcatacaaatgaagcggatgatgct
aacccttatgttacttcttttcgtggcatcgataacaaggtttattacattttagatcca
aagaacaacgctcaactgctgaacttctctggctgtgggaatacactaaactgcaaccat
ccggttgtcatggaactcgtactcgacagcttgagacattgggtgaaggagtatcacata
gatggatttcggtttgaccttgcaagtgttctttgtcgtggaacagatggcagtcctctt
gatgctcctccgctcattaaggaaattgccaaagattctgtattatctcgatgtaagatt
attgccgaaccttgggattgtggtggcctttatttagtagggcagttccctaactgggac
aggtgggctgaatggaatggaaagtacagagacgatattcgaagattcatcaagggtgat
cctggtatgaagggggtgttggcaactcgtgtctctggatcagccgatctctaccaggtg
aacaagcggaagccttatcatggtgtgaatttcataatcgcacatgatgggtttacctta
tgcgaccttgtttcatacaacttaaagcacaatgatgcaaatggagaaagtgggcgtgat
ggatgcaatgacaattttagctggaactgtggtgttgaaggagaaacaaatgattcaaat
gtgttagctctgcgttcaagacaaatgaagaacttccatctggcattaatgatttctcaa
ggcaccccaatgatgttgatgggagatgaatatggtcatacacgttatggaaataataat
agctatggacatgatacctgcataaataatttccagtggggacagttggaagaaagaaga
tatggccatttcagatttttctcagagatgattaagtttcgccagaatcacccaatactg
aaacgagacaggtttcttaacaaaaatgatgtcacctggcatgaggattgttgggagaac
atggaaagcaaattcttggcatttacgatacatgaccacagttcgggtggagatatctat
ttggcattcaacgcccatgactattttgtggatgctgtaattcccccagcacctcagcat
aaacgttggaaccgtgtggtggataccaacctggaatcaccaaatgatattgtaccggaa
ggggtgccatttactggatcaggttacagaatagctccatactcttccatcctgctcaag
gcaaacccatag
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