Brachypodium distachyon (stiff brome): 100831358
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Entry
100831358 CDS
T01717
Name
(RefSeq) oligouridylate-binding protein 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100831358
03041 Spliceosome [BR:
bdi03041
]
100831358
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100831358
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100831358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
100831358
NCBI-ProteinID:
XP_003574781
UniProt:
I1I8M7
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All DBs
Position
3:42399977..42405315
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AA seq
452 aa
AA seq
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MNGAGGSQQQQQQQQQQRLRQQQQQQQQQQALLMQQALQQQQYQSGVLAAAAAAAMTQME
PVSNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSFGFVD
YYDRRSAALAIMSLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYA
CFSVYTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK
TNAEEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTTVYVGNLGHEVNRD
ELHRHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGLVIRGKPIKCSWGNK
PTPPGTSSKPLPPPGPAYQPVAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAAGGHGLA
GQVSAGLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccggcgggagccagcagcaacagcagcagcagcagcagcagaggctccgc
cagcagcagcagcagcaacaacagcagcaggccctcctgatgcagcaggcgttgcagcag
cagcagtaccagtcgggcgtcctcgcggccgccgccgcggcggccatgactcagatggag
cctgtttcaaatggcaatctcccacctgggtttgatccatccacatgtcgcagtgtgtat
gtgggaaacgtacatcctaatgtcactgagagccttctgatagaagttttccagagctct
ggccctgtggaaagatgcaagctcatcaggaaagagaagtcttcctttgggtttgttgac
tactatgatcggaggtcagcggctcttgcaatcatgagccttcatggacgtcacatatat
ggccaagcaatcaaggtgaactgggcatatgcaagcacacagcgggaggatacatctgga
catttccatatttttgttggtgatttaagttctgaagtgaatgacgcaactctttatgcc
tgtttctcagtatatacttcttgttctgatgctcgagtgatgtgggacaataaaactgga
cgctccagaggttacggctttgtctcctttcgcaatcaacaggaagctgaaactgctata
actgaaatgactggtaaatggcttggcagcagacaaataaggtgcaactgggcaacaaag
actaatgcagaagaaaaacaagaaaccgacaaccataatgcagttgtactgacgaacggt
agttccagtaatgcagcaatggagggaaaccaggaaacaggaagtaaagagaatccggag
aacaaccctgatttcactacggtgtatgtaggcaaccttgggcatgaggtcaatcgagat
gagcttcaccgccacttctataacttaggtgttggggcaatcgaggaagttcgtgttcaa
caggataaagggtttggatttgtaaggtacaatacccatggtgaggcagcactagcgatt
cagatggccaatggattggtcatccgtggcaagccaataaagtgctcatggggcaacaaa
ccaactccgcccgggacatcttctaagccgctgccacctccgggccctgcttaccaaccc
gtagcaatggcgggtgtgccgcaaggcttcacagcagccgagctcctggcttaccagagg
cagctcgccttaagccaggccgcagcggggcagattgctgctggcgggcacggtctggcg
ggccaggtatccgcagggcttcttgctgctggctcccaggccctctacgacggctacccg
aaccagtcgtcggcgcagcagcttatgtactacaactag
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