KEGG   Brachypodium distachyon (stiff brome): 100831358
Entry
100831358         CDS       T01717                                 
Name
(RefSeq) oligouridylate-binding protein 1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100831358
   03041 Spliceosome [BR:bdi03041]
    100831358
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100831358
Spliceosome [BR:bdi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    100831358
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3 RRM_occluded RRM_5
Other DBs
NCBI-GeneID: 100831358
NCBI-ProteinID: XP_003574781
UniProt: I1I8M7
LinkDB
Position
3:42399977..42405315
AA seq 452 aa
MNGAGGSQQQQQQQQQQRLRQQQQQQQQQQALLMQQALQQQQYQSGVLAAAAAAAMTQME
PVSNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSFGFVD
YYDRRSAALAIMSLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYA
CFSVYTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK
TNAEEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTTVYVGNLGHEVNRD
ELHRHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGLVIRGKPIKCSWGNK
PTPPGTSSKPLPPPGPAYQPVAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAAGGHGLA
GQVSAGLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgaacggcgccggcgggagccagcagcaacagcagcagcagcagcagcagaggctccgc
cagcagcagcagcagcaacaacagcagcaggccctcctgatgcagcaggcgttgcagcag
cagcagtaccagtcgggcgtcctcgcggccgccgccgcggcggccatgactcagatggag
cctgtttcaaatggcaatctcccacctgggtttgatccatccacatgtcgcagtgtgtat
gtgggaaacgtacatcctaatgtcactgagagccttctgatagaagttttccagagctct
ggccctgtggaaagatgcaagctcatcaggaaagagaagtcttcctttgggtttgttgac
tactatgatcggaggtcagcggctcttgcaatcatgagccttcatggacgtcacatatat
ggccaagcaatcaaggtgaactgggcatatgcaagcacacagcgggaggatacatctgga
catttccatatttttgttggtgatttaagttctgaagtgaatgacgcaactctttatgcc
tgtttctcagtatatacttcttgttctgatgctcgagtgatgtgggacaataaaactgga
cgctccagaggttacggctttgtctcctttcgcaatcaacaggaagctgaaactgctata
actgaaatgactggtaaatggcttggcagcagacaaataaggtgcaactgggcaacaaag
actaatgcagaagaaaaacaagaaaccgacaaccataatgcagttgtactgacgaacggt
agttccagtaatgcagcaatggagggaaaccaggaaacaggaagtaaagagaatccggag
aacaaccctgatttcactacggtgtatgtaggcaaccttgggcatgaggtcaatcgagat
gagcttcaccgccacttctataacttaggtgttggggcaatcgaggaagttcgtgttcaa
caggataaagggtttggatttgtaaggtacaatacccatggtgaggcagcactagcgatt
cagatggccaatggattggtcatccgtggcaagccaataaagtgctcatggggcaacaaa
ccaactccgcccgggacatcttctaagccgctgccacctccgggccctgcttaccaaccc
gtagcaatggcgggtgtgccgcaaggcttcacagcagccgagctcctggcttaccagagg
cagctcgccttaagccaggccgcagcggggcagattgctgctggcgggcacggtctggcg
ggccaggtatccgcagggcttcttgctgctggctcccaggccctctacgacggctacccg
aaccagtcgtcggcgcagcagcttatgtactacaactag

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