Brachypodium distachyon (stiff brome): 100831520
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Entry
100831520 CDS
T01717
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00100
Steroid biosynthesis
bdi00909
Sesquiterpenoid and triterpenoid biosynthesis
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100831520
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
100831520
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bdi01006
]
100831520
Enzymes [BR:
bdi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100831520
Prenyltransferases [BR:
bdi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100831520
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Paralog
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Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
100831520
NCBI-ProteinID:
XP_003564211
UniProt:
I1GLZ2
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Position
1:complement(3230996..3238011)
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AA seq
402 aa
AA seq
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MGALSRPEEVAPLVKMAAAAWRIRRQIPPQEHWAFAYDMLQKVSRSFALVIQQLGPDLRN
AVCIFYLVLRALDTVEDDTGVPTEVKLPILQEFYRHIYNPDWHFSCGRGHYRVLMDNFRH
VSIAFLELDQGYQNAIEEITRRMGAGMAIYICKEVETVDDYNEYCHYVAGLVGYGLSRLF
HATGTEDLASDQLSNSMGLFLQKTNIIRDYLEDINEIPRCRMFWPREIWSKYADELEDLK
YEENSERAVQCLNDMVTNALIHAEDCLQYMSALKDNANFRFCAIPQIMAIGTCAQCYNNV
QVFRRVVKMRRGLTARIMDETKSMSDVYTAFYEFSSLLESKIDDNDPSAAITRERVDAIK
KRCRSSGLLKRRGYDLQKSQYRPMLILLVLMLVALMLAVLAK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgctgtcgcggccggaggaggtggcgccgctggtgaagatggcggcggcggcg
tggcggatcaggcgccagatcccgccgcaggagcactgggccttcgcctacgacatgctc
cagaaggtctcccgcagcttcgcgctcgtcatccagcagctcggccccgacctccgcaat
gccgtctgcatcttctacctcgtgctccgagccctggacaccgttgaggatgacactggc
gtccctaccgaggtgaagctgccgatccttcaggaattctaccgacacatctacaaccct
gactggcatttttcatgtggaagagggcactacagagtgctgatggataattttagacac
gtctccattgctttcttggagctggatcaaggatatcagaacgcaattgaagaaatcacc
aggcggatgggagcaggaatggcaatatatatatgcaaggaggttgaaactgttgatgac
tataatgagtactgccactatgtagcagggctagtaggttatggactttccaggctcttt
catgctacaggaacagaagacctggcttcagatcaactttcgaattcaatgggcttattt
ctgcagaaaaccaatattataagggattacttggaggacataaatgagataccgaggtgc
cgtatgttctggcctcgagaaatatggagtaaatatgctgatgaacttgaggatcttaaa
tatgaggagaattcagaaagggcggtgcagtgcttgaatgatatggtgacaaatgctttg
attcatgctgaagattgccttcagtacatgtcagcattgaaagataatgccaacttccgt
ttttgtgcaatacctcagataatggcaattggaacctgtgctcagtgctacaacaatgtg
caagtctttagaagagttgttaagatgaggcgtgggctcacggcacgaataatggatgag
acaaaatcgatgtcagatgtctatactgctttctatgagttctcttcattgcttgaatcc
aagattgatgataatgacccaagtgctgcgataacacgggaacgtgttgatgcaataaag
aaacgttgcagatcatcgggtttgcttaagagaaggggatatgacttgcagaagtcacag
tatcgacctatgctgatcttgcttgtacttatgctggtggctcttatgttggctgtactt
gccaagtaa
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