Brachypodium distachyon (stiff brome): 100831686
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Entry
100831686 CDS
T01717
Name
(RefSeq) THO complex subunit 7B
KO
K13176
THO complex subunit 7
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100831686
09122 Translation
03013 Nucleocytoplasmic transport
100831686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100831686
03041 Spliceosome [BR:
bdi03041
]
100831686
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100831686
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100831686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
APG6_N
YwqH-like
WHD_LYAR
Motif
Other DBs
NCBI-GeneID:
100831686
NCBI-ProteinID:
XP_003577851
UniProt:
I1INL4
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All DBs
Position
4:complement(31097558..31100422)
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AA seq
242 aa
AA seq
DB search
MLTKGRKVAGRGEDMSAHYAFGPREDDAIIKHRLLTRITTTRGEPPLKKLQKKFMSFAAE
IEKDADNTSDCERLYKAFLQEINTYELPLLKSKAVVDANLREKESFNGLQVEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKLISLQPPRSETEKLIAELEKEIASLEAESAA
CIRTLELRKKQFALLLHVVEELQISIDDEQRSIADELRATAEEPKISIDDSNGGASDAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaaaggtaggaaagttgctggaaggggtgaagacatgtctgcacattatgca
tttggaccacgtgaggatgatgcgattattaaacaccggcttctgactaggatcacaact
accaggggtgaaccacccctaaagaagcttcagaagaagttcatgtcctttgctgctgag
atcgagaaggatgcagacaatacaagtgactgtgagaggctgtacaaggcatttctacag
gaaattaacacgtacgagctgcctcttcttaaaagcaaggctgtggttgatgcaaatctt
agggagaaggagagcttcaatgggctgcaggttgagatccagcgacagatcttgcaagct
cagactgatattgaggatcttaagaagcaacttgaacaaagcaagattgagaggcagcac
aaagaggagtgcgaagcaatcaggaaactgatttctttgcagcctccgcggtcagaaact
gagaaactgatcgctgaacttgagaaagagattgctagtttggaggctgagagtgctgca
tgtatacggactttggagcttaggaagaagcagtttgctcttcttctgcacgtggttgag
gaattgcaaatctcgatcgacgatgagcaaaggagcatagcagatgagctgagagccacc
gctgaagagccaaagatcagcatagatgacagcaacggtggtgcttcagatgccatggct
gtagactga
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