Brachypodium distachyon (stiff brome): 100831728
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Entry
100831728 CDS
T01717
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100831728
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bdi04040
]
100831728
Ion channels [BR:
bdi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100831728
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
100831728
NCBI-ProteinID:
XP_003567360
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Position
2:55598151..55601407
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AA seq
734 aa
AA seq
DB search
MAGFLHRHFLPPFRRPPLPFFHHGASSAVSASQQPGGQQQDGRRPWTPRRILDPGDEVML
RWNRLFLVTCMVGLFVDPMYFYLLYSSGESCVKIDMGIGVAVTAVRTIADLFYLAHMILK
FRTAFVAPSSRVFGRGELVRDPDQIAIRYLKNDFIVDLAAMLPIPQVIIWFVIPAVSTSS
ANHTNNTLSMIVLIQYIPRVFLIISLNSKIVKSSGVVTRTAWAGAAYNLLLYTLASHVLG
ALWYLLSIERQYTCWVEACTSENGTEPNQNIPKCLMTYLDCKSVHDPVRKSWYEVSHIDT
QCKLPGATYKYGLFADALNLDVVGATFFEKYLYCLWWGFRNLSSYGQNLQNSTYSGETIF
CILICIMGLVFFSHLIGNMQTYLQSMTVRLEEWRVKRRDIEEWMRHRQLPLELQERVRRF
FQYKWLATRGVDEESILQSLPLDLRREIQRHLCLALVRRVPFFSQMDEQLLDAICERLVS
SLSTKDAYIVREGDPVSEMLFIIRGELESSTTDGGRTNFFSSITLRPGDFCGEELLTWAL
MPNPSLNFPQSTRTVRSVTEVEAFALRAEDLKYVANQFKRLHSKRLQHAFRYYSHQWRSW
GACFVQGAWRRYKKRKLAKELMKQEGLLLGFDDGQGGAGGDGGSGVGDSDSAPLLGDYGK
DGAASAAAEGGGAAAGGGGGSHLGVTFLASKFAKNTKKGAHQKVVAQHDVSTIKLPKLAK
PDEPDFSLHTDDAL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttcctccaccgccacttccttcccccgttccggcgcccgccgctgcccttc
ttccaccacggcgcctcctccgccgtctcggcctcccagcagcccggcgggcagcagcag
gacgggcggcggccatggacgccgcgccggatcctggacccgggcgacgaggtgatgctc
cgctggaaccgcctcttcctggtgacatgcatggtgggcctcttcgtggaccccatgtac
ttctacctcctctacagctccggcgagtcctgcgtcaagatcgacatgggcatcggcgtc
gccgtcaccgccgtccgcaccatcgccgacctcttctacctcgcacacatgatcctcaag
ttccgcaccgcgttcgtcgcgcccagctcgcgcgtcttcggccgcggcgagctcgtcagg
gaccccgaccagatcgccatcagatacctcaagaacgacttcatcgtcgacctcgccgcc
atgctcccaatcccacaggtgatcatctggtttgtgataccagccgtgagcacctcctcg
gcgaatcacaccaacaacacgctctccatgatcgtgctgatccagtacataccaagggtg
ttcctcatcatatccctcaactccaagatcgtcaagtccagtggagtcgtcacaagaact
gcctgggcaggggctgcctacaacctgcttctctacacattggcaagccatgtgcttgga
gcgctgtggtacctgctgtcgattgagcggcagtacacgtgctgggtggaagcctgcacg
agcgagaacggcaccgagccgaaccagaacataccgaaatgcttgatgacctacctggac
tgcaaatcggttcacgaccccgtcaggaagagctggtacgaggtaagccacatcgacacg
cagtgcaagctccccggggctacgtacaagtacgggctgttcgcagacgcgctcaacctc
gacgtcgtcggcgccaccttcttcgagaagtacctctactgcctatggtgggggttccgg
aacttgagttcctatggacagaacttgcagaacagcacctacagtggggagaccatattc
tgcatcctgatttgcatcatgggactcgtcttcttctcgcacctcatcggaaacatgcag
acgtacctgcagtccatgacggtgcggctggaggaatggcgggtgaagcggcgggacatc
gaggagtggatgcgtcaccggcagctccccctggagctccaggagcgtgtccgccgcttc
ttccagtacaagtggctggccacccgcggcgtcgacgaggagtccatcctccagtccttg
cccctcgacctccgccgcgagatccagcgccacctctgcctcgccctcgtccgccgcgtg
cccttcttctcgcagatggacgagcagctgctggacgcgatctgcgagcggctggtgtcg
tcgctaagcacgaaggacgcctacatcgtccgggaaggcgacccggtcagcgagatgctc
ttcatcatccgcggggagctggagagctccacgacggacggcgggcggacaaacttcttc
agctccatcacgctccggccgggggacttctgcggcgaggagctgctgacctgggcgctg
atgcccaacccgtcgctcaacttcccgcagtccacccggaccgtccgctccgtgaccgag
gtggaagccttcgcgctccgggccgaggacctcaagtacgtggccaaccagttcaagcgg
ctccacagcaagcggctgcagcacgcgttccggtactactcccaccagtggcgcagctgg
ggcgcgtgcttcgtgcagggggcctggcggaggtacaagaagcggaagctcgccaaggag
ctcatgaagcaggaaggtttgctcttgggattcgatgatgggcaaggtggcgccggcggg
gatggtgggtctggggtgggcgatagtgacagcgcgccgttgcttggggattacggcaag
gatggcgcggcgtcggcggcggcggagggaggaggagcggcggcggggggcggcgggggg
tcgcaccttggggtgaccttcttggcgtccaagttcgccaagaacaccaagaagggcgcg
caccagaaggtggtggcgcagcacgacgtctccaccatcaagctccccaagctggccaag
cccgacgagccggatttctccttgcacaccgacgacgccctgtag
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