Brachypodium distachyon (stiff brome): 100831932
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Entry
100831932 CDS
T01717
Name
(RefSeq) AP3-complex subunit beta-A
KO
K12397
AP-3 complex subunit beta
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100831932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100831932
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Others
AP-3 complex
100831932
Endosome - Golgi transport
100831932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C
AP3B1_C_2
HEAT_2
HEAT
TPR_TNPO3_IPO13_3rd
Svf1_C
Motif
Other DBs
NCBI-GeneID:
100831932
NCBI-ProteinID:
XP_003565152
UniProt:
I1HVQ0
LinkDB
All DBs
Position
2:58777687..58783244
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AA seq
1111 aa
AA seq
DB search
MFGLQASSAAASWVVGRMGTDAHLYDDPEDASIPALLDSRFDADRIDALKRLLALIAQGV
DVAHLFPQVVKNVAAQSLEVKKLVYLYLLHYAEKRQNEALLSINIFQKDLSDINPLVRAW
ALRTMAGIRLHVVAPLVLVAVKKCARDPSAYVRKCAAYALCKLFDLLPEESTTLEEIVDV
LFSDNSPGVVGAAAVAFKSVCPNCLALISKHFRRLCETLPDIEEWYQITLIEILLRYVIA
RHGLVKDSVMFASNLSLVAQGGVTVDTMSYTQPTSVGGISGTRPNIMLLRHYIEEHPGCF
DREDDKFSSPSVTTSTNDDVAILLKCTSPLLWSQNSGVVLAAASVHWIMAPVEEVKRIVG
PILFTLRSSPDAAYVVLGDILVFAKTAPLLFAPYDEDFFICSSDPYQTRALKLEILTTIA
SESSIPAIFEEFEDYIKDPNRRFVADTVAAIALCAQKLPSISSTCLEGLLSLVFYESSIT
NSVHLDGEDIVLVQAILSIKAIVKIDAASHEKVIIRLVRRLDKIKQPAARSLIIWIFGEY
SSVGNLIPKIIPPVLKYLAWSFAAEVLETKLQILNASAKVIIHSAEEHLEEFKRIMAYIT
DLAACDLNYDVRDRARFISNLLPCGKTSLNENDSTCQSHSQDIRKELADHIFGGKIPTTS
HSDSNYRIYLPGSLSQVVLHAAPGYAPLPKPQSMELIYHTIKLTRDTANSSESNNSNAES
ESSYESGSVYDSESEGGGLSDKDATGSSQYPNDDGHNLHHRQDNQEAPLVHMYDDNVDQG
QTGRNVEDNLSSLISTDLTELMSKSALESWLDEAPALPAVQESMQKSIARVSFTNRSFER
KPKLHTLLDPSNTSGLSVIYAFSAEISPISRLLVCIDLFVENNTTDQLTDIIIKSEEASI
SKDEMDQTSEGSASIPTLAPVEEIRSLAPQQTVKMILQVHFHHHLLPLKLSVLCNGKRHP
AKLHPDIAYFVRPLPMDLNAFLCKENQLRGVFEYARRCTFKDHLQKHGCTEESTDHTDKN
LLVAQSLASKVLSNANVHLVSMDMPVTFSIDDASGLCWRFSSEILSTSNPCLITILAEGH
TSGPLDLTVKVNSEDTVFGLNLLNRVVTIIE
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtcttcaggcgagcagcgcggcggcgtcgtgggtggtggggcggatggggacg
gacgcgcacctctacgacgacccggaggacgcatccatcccggcgctgctcgactcccgc
ttcgacgccgacaggatcgacgcgctcaagcgcctgctcgccctcatcgcgcagggcgtc
gacgtcgcccacctcttcccgcaggtggttaagaacgttgcggcgcagtcgctggaggtc
aagaagctcgtctacctctacctcctccactacgccgagaagcgccaaaatgaagctctc
ctttctattaacatattccagaaggatttatcggatataaacccattggtgagggcttgg
gccctacgcaccatggctggtatcagattacatgtcgttgctccacttgtgctagtggct
gtaaagaaatgtgccagggatccatcggcgtatgtcagaaaatgtgcggcgtatgcactt
tgtaagctcttcgacttgcttccggaggaaagtacaactttggaggagattgtggatgtt
ttgttcagtgacaattccccgggagtagtcggagccgccgctgttgcatttaagtcagtc
tgtccaaattgtttagcattgatatcaaaacatttccgcaggctatgtgaaacactgcct
gatatcgaagaatggtatcagattactctaattgagattctcttgcggtatgtcatagct
agacatggattagtcaaggattctgtaatgtttgcttcaaatttatctttggtggcccag
ggtggtgttactgttgatactatgtcctacactcaaccaacaagtgttggtgggatcagt
ggcactaggccaaacatcatgttgcttcggcattacattgaagaacatccaggatgtttt
gatagggaagatgataagttcagctctccatctgtcactacgagtacgaacgatgatgtt
gcaattcttttgaaatgcacatctcctcttctatggagccaaaacagtggagtcgtactt
gcagcagcaagtgttcattggatcatggctccagttgaggaagtgaagagaattgttggg
ccgattttgtttactttgcgttcatctcctgatgcagcatatgtggtgcttggcgacata
ctggtatttgcaaagactgctccattattgtttgctccatatgatgaggacttcttcata
tgctcttcagatccataccagactagggctttaaagcttgaaatactgaccaccatcgcc
tcagagtcatctattcctgccatttttgaagaatttgaggattatatcaaagatccaaat
aggagatttgtggcagatacagttgctgccattgcgctgtgcgcccagaagctcccctct
atctcatccacttgccttgaggggcttctgtcccttgtattttatgaatcatctatcact
aactcagttcacttggacggagaagatattgttttagttcaagcaatcctttcaatcaaa
gcaatagtgaaaatagatgcagcttctcatgagaaggtgattatccgcctggttcgcaga
ctggataaaattaagcagcctgcagcacggtccttgattatttggatatttggcgagtat
agctctgtaggaaacctcattccaaagataattccacctgttctcaagtatctagcatgg
tcttttgctgctgaagtgctcgagacaaagcttcagatcctaaatgcttctgcaaaggtt
ataatacattctgcagaagaacacttggaagaattcaaaaggataatggcatatatcacc
gacctggctgcatgtgacttgaattatgatgtccgtgatcgtgcacgctttatatcaaat
cttttgccatgtggcaagacctctttaaatgaaaatgactccacatgtcaatctcacagt
caagatattcgtaaggagctagctgatcatatctttggtgggaagatacctacaacatct
cattcagacagcaactaccggatttatcttcctggttccctgtcacaagttgttcttcat
gcagctcctggttatgcaccacttccaaagcctcaaagtatggaattaatttatcacacc
ataaagctgaccagggacacagctaattcttctgaaagtaataattccaatgctgaatct
gagtcttcctatgagagtggctctgtttatgattcagagagtgaaggtggtggcttatct
gacaaagatgccactggatctagccaatatccaaatgatgacggacataacctccatcac
cgacaagataatcaggaagcccctctggttcatatgtatgatgacaatgtagatcaaggc
cagacaggtcgaaacgttgaggacaatttgtcatctctcatctctactgatttgactgaa
ttaatgtctaagtcagccttggagtcatggcttgacgaggctcctgctttgccagctgtt
caggaatctatgcagaaatcaattgcaagagtttcttttaccaaccgcagctttgagcga
aaacctaaactgcatacattgctagacccttctaatactagtggtctgagtgttatatat
gccttctcagcggagatttcccccatatcacgcttgctggtatgtatagacttgtttgtt
gagaataatacaacagaccagttgacagatataatcattaaatctgaagaggcttctatt
agtaaggatgaaatggaccaaacatcagaaggatctgcaagcatcccaactcttgctcct
gtggaagagatacgctcgttggctccacaacagactgtgaagatgattcttcaagttcac
ttccatcatcatctcttgcccctaaagctgtctgttctctgcaatgggaaaaggcatcca
gctaaacttcaccctgatattgcttattttgtacggccactacccatggacttgaatgct
tttctttgcaaggaaaaccagctgaggggagtgtttgagtatgctagaaggtgcaccttc
aaagatcatcttcagaagcatgggtgcactgaagagagtacggaccacaccgataaaaac
cttctagtagcgcagagtcttgcatcaaaagtactcagcaatgccaatgttcacctagtg
tcaatggatatgccagtaaccttcagcatcgacgacgcgtccggcttatgctggcgattt
agcagtgagattctgagcacttcaaacccctgcctaattaccatcttggcggaaggtcat
acctcaggaccactggatctcaccgtcaaggtgaattctgaagatacggtgtttggccta
aacctcctgaacagagttgtaacaatcatcgagtga
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