Brachypodium distachyon (stiff brome): 100831957
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Entry
100831957 CDS
T01717
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100831957
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
100831957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
DUF1122
DUF630
Motif
Other DBs
NCBI-GeneID:
100831957
NCBI-ProteinID:
XP_003570647
UniProt:
I1IF99
LinkDB
All DBs
Position
3:58261382..58265533
Genome browser
AA seq
786 aa
AA seq
DB search
MEAAAPAPPLPRHPDITPELRRFLDVRFRSPADLAAAADVEAEIRGRCAELESSVSELSV
RLAAAASAYSSSLQAAGSALRGVRAGLDALKSSTAQTGVRENVEVGSEKMLFEQLPPLAT
DVARVDMVRDYAETALKLDSLVGDVEDAVSSSVTGKLISRGGKSEQTHHVAIGYLKSIED
TLASVTRTRPQWARLISAVDHRVDRSLALLRPQAIVDHRALLSSLGWPPSIAGTNISDSN
SRKPAEIVNPLFSMRGDLTKRYSESFLSLCSLQELQKRRKTRQLQGHNVNSELRQPLWVI
EELVNPLSAAAQRHFSKWVENPELVFALAYKITRDFVDSMDEILQPLVDKANLVGYSCRE
EWISGIVIALSTYLAKEIFPKQIELLEESSSNDASGTPFQARVSWLNLVDLMISFDKRTQ
GLISSTGLQFSVKDDDNWQRISVLSVFCDRPDWLEIWAEIERHETLGNLKSAMENEKNWS
KRIEGTMIEYGSEDYKSPAITCAVQQGLSLLIDRARPIPNISLRAEFIRISASPVISEFL
GCMFRRCQEAEGLTALADDNAVFKVSQSINAARYLESTLTEWCEDMFFLEMESLPLSGEG
GGIFQQEINQLKEFRAEWVDKISTVILRAFDARSWDYLRNKRQWQEHSEGPSRAIIESSG
YMQGRLSKLEDSLNVLDFVSVWRVVANGVDQLLFAGIFTGSPKFSNGGVEKLHADLSVLF
AVFSAWCLRPEGFFPRLSEVLKLLKVDEKHLIDRSFTDKNWLRELGVRHLTAAEAERIIK
NRVYDE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggcagccccggctccgccgctccctagacatccggacatcaccccggagctc
cggcgcttcctcgacgtccgcttccgctcgccggccgacctcgccgcggccgccgacgtc
gaggccgagatccgcggacgctgcgcggagctcgagtcctcggtctccgagctgtccgtg
cgcctcgcggctgcagcctccgcttactcctcttctcttcaggccgctggctccgccctc
cgcggcgtgcgcgctggcctcgacgccctcaaatcctccaccgcccagacaggggttagg
gaaaatgtggaggttgggagcgagaagatgttgtttgagcaactccctcccctggccacc
gacgtggcgagagtcgacatggtcagagattacgctgaaacggctctaaagcttgacagt
ttggtcggtgatgtagaagatgccgtttcgtcttctgtgactggaaaacttatatctcgt
ggaggaaagtcagagcaaacacaccatgttgctattggatatcttaaatcgatagaagat
actttagcttcagttacaaggaccagaccacaatgggctcgtcttatatctgcagtggat
cacagagtagacagatctttagctttactgagaccacaagccattgttgatcatcgagct
cttctatcatcccttggctggcctccttccattgctggaacaaatatttcagatagtaat
tccaggaaaccagcagagattgtgaacccattattttcaatgaggggtgacctgacaaag
aggtattcagagagctttctttcattatgcagtttacaggaattacagaaacgcagaaaa
actaggcaattacaagggcataatgtgaatagtgaactacgtcaaccattatgggtgatt
gaggagttagtaaatccattatctgctgctgcacagcgtcatttttccaaatgggttgag
aatcctgaattggtttttgcccttgcttacaagataacaagagatttcgttgattccatg
gatgagatactgcagccccttgtggacaaggcaaatcttgtaggttatagttgcagagag
gagtggatttcgggaatagttattgcattgtctacatatctggcgaaagagatatttcct
aagcagattgaacttcttgaagagagcagctcaaacgatgcaagcggcacaccatttcag
gctagagtctcatggcttaatcttgttgatctaatgatatcttttgacaagcgaactcaa
ggtttgatctcgagtacaggactgcaattttcagtaaaggatgatgacaattggcaaagg
atctcagtgctctctgtcttctgtgatcggccagactggcttgaaatatgggcagagatt
gagagacacgagactcttggtaacctgaagtcagcaatggagaatgagaaaaattggagt
aagaggattgaaggaacaatgattgagtatggatcagaggattacaaatctccagcaatt
acctgtgctgttcaacaaggcttgtctttgctaattgatcgtgctaggcccattcctaac
atttcacttagggcagaattcattaggatttctgcttcacctgtaatatcagaatttctc
ggttgcatgtttcggaggtgccaagaagcagaggggctaactgctctggcagatgataat
gctgtgttcaaagtatcacagtccattaatgcagctcgatacttggaatccacattgaca
gaatggtgtgaggatatgttctttcttgaaatggaaagtctaccactaagcggtgaaggt
gggggtatattccaacaagagataaatcaattgaaagagttcagagcagaatgggttgat
aagatttcgactgtcattcttagggcattcgatgctcgctcctgggattatctgagaaat
aagaggcagtggcaggagcattcagaaggaccgtccagggccatcatagaatcttcaggc
tacatgcaggggaggctatctaagcttgaagatagcctaaatgtcctggatttcgtatca
gtatggagagttgtggcaaacggagtagaccagctgcttttcgcaggaattttcacagga
agcccaaagttcagtaatggtggggtcgaaaagcttcatgctgatctgagtgttctgttt
gccgtattttcagcctggtgtctgaggcctgaaggcttcttcccaagactgtccgaagtt
ttgaaattgctaaaggttgatgagaagcatcttatagatagatcgtttacagataaaaac
tggctaagggagcttggtgttaggcatctgacagctgctgaggctgaaaggataataaaa
aatagggtgtatgatgaatga
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