Brachypodium distachyon (stiff brome): 100832204
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Entry
100832204 CDS
T01717
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100832204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100832204
03036 Chromosome and associated proteins [BR:
bdi03036
]
100832204
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100832204
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100832204
PBAF complex
100832204
GBAF(ncBAF) complex
100832204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100832204
NCBI-ProteinID:
XP_003579601
UniProt:
I1IX10
LinkDB
All DBs
Position
5:10315103..10317336
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AA seq
526 aa
AA seq
DB search
MATGGNPNPAAGPGHPRQPQPPQGSSPATPHTHMRPPSLAGSPFQGLFNTPPSHSPAFQI
HMGASPSPQTPLMAAAASAAASAKRPPQKPPSRPPAPTSSAAAAAAAASMAAAYKAANAG
GIDLTPAARRNKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARKKLDIQEAL
KTPPSLQRTLRIYVFNTFSNQAARTIPPPKNAEPPTWSLKIIGRVLEDGAELDPAGVVPK
HNPAYPKFSAFFKRVTIGLDPSQYPENHTIVWENARSAAPQEGFEVKRKGDREFLANIRL
EMNYTPEKFKLSQPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPGDPSYFICDPQLKKV
FGEDKMRFAMLSQKISQHLAPPPPINLEHKIKLSGNQAHASACYDVLVDVPFPLQKEMVA
FLANTEKHKDIEACDEVISASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSKDLKLV
AGEANRNIERERRADFYNQPWVEDAVIRYLNRKPPGGNEGPGAGGS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggcggaaaccccaaccccgccgccggccctggccacccacgccagccacag
cccccgcaaggaagctctccggcgacgccgcacacccacatgcgccctccctctctcgcc
ggctcccccttccagggtctcttcaacaccccgcctagccacagccctgctttccagatt
cacatgggcgcctccccttcccctcagaccccgctaatggccgcggcagcctccgctgcc
gcctccgccaagcgccctccccagaagcccccttcgcgtccaccggcacccacatcctcc
gctgctgctgcggcggcggcggcgtccatggctgcagcttataaggctgctaacgcaggc
ggcatcgacctcacccccgccgcacgccgcaacaagaagcgcaagctcccggagaagcag
ctccccgaccgcgtcgccgcgctgcttccagagtccgcgctctacacgcagctgctcgag
ttcgaggcccgcgtggacgcagcgctcgcgcgcaagaagctggacatccaggaggcgctc
aagacgccgccgtcgctccagcgaacactccgcatctacgtgttcaacaccttctccaac
caggcggcccgcaccatcccgccgcccaagaacgccgagccgcccacctggtcacttaaa
atcatcggccgtgtgcttgaggacggtgcggagctggacccagcaggtgtcgtacccaag
cacaacccggcgtatcccaaattctctgcgttctttaagagggtgactattgggcttgac
ccatcacaatatccggagaaccatacgattgtttgggagaatgcgcggtctgctgcgccg
caggaagggttcgaggtgaagaggaaaggggacagggaattccttgcgaatatccgtcta
gagatgaactatacaccggagaagttcaagctgtctcagccattgatggaggtccttggg
gttgaggtggacactcgtgcaagggtgattgctgccctttggcagtacatcaaggcaaag
aagctgcagaatccaggtgatccttcgtactttatatgtgaccctcagttgaagaaggta
tttggggaggataagatgaggtttgcgatgctgtcacagaagatatcacaacatcttgca
cctccaccgcccatcaacttggagcataagattaagctatcaggaaatcaagcacatgcg
agtgcttgctatgatgtgttggtggatgttccttttcccctgcagaaggagatggtggca
tttctcgccaatactgagaagcacaaggacattgaggcttgtgatgaggttatatctgct
tcaatcaagaagatccatgagcatcgcaggaggagggcattcttccttgggttcagccag
tccccagtggagttcatcaatgcgctgatagcatcccagagcaaagatttgaagctcgtt
gctggggaagcaaatagaaacattgaaagggaaagacgagcagacttctataaccaacca
tgggttgaggatgctgttataagatatttgaaccgtaagccgcctggcggcaatgaaggc
ccaggtgctggtggttcttga
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integrated database retrieval system
