KEGG   Brachypodium distachyon (stiff brome): 100832305
Entry
100832305         CDS       T01717                                 
Name
(RefSeq) polygalacturonase-2
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi00040  Pentose and glucuronate interconversions
bdi01100  Metabolic pathways
Module
bdi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    100832305
Enzymes [BR:bdi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     100832305
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim End_N_terminal
Other DBs
NCBI-GeneID: 100832305
NCBI-ProteinID: XP_003581528
LinkDB
Position
5:complement(21533169..21535389)
AA seq 406 aa
MVSQNTFHGLTIIGVRTAILLLLACLAAARGQERAFSVVNFGARGDGTTDDTKAFEQAWA
ATCGARGPSATLHVPANRSFLVGPTTFHGPCTSARVTVQVLGTITAPPSTSAAWKWSDYW
LMFQQVRGLTVTGGSAGVLDGRGQTWWPRKCKRNGCLVVAPTALKLVSCDGLELSYLSSK
DSPQMHIVVSTSRGVNMTHLTITAPGDSPNTDGIHLDRSEGVQITGSTIGTGDDCVSIGS
GTRFVTVDGLVCGPGHGVSVGSLGRKGSNAAVEYIDVRNVHFINTSNGARIKTWLGGQGY
ARSISFTDIKFTNVDHPVVINQFYVDRAIQSMGGVAIRNITYTNLNGTSSQKTAVAFDCS
ESGSCTGIHVNSMAITGTDGQATVARCQNVQGDTSGNVSPHIPCLG
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggtgagccagaacacatttcacggtcttactatcatcggcgtccgcacggccatcctg
ctgctcctggcgtgtctcgcggcagcccgtgggcaggagcgcgcgttcagtgttgtgaac
ttcggtgcccggggcgacggcaccacggacgacaccaaggcgttcgagcaagcgtgggcc
gcaacgtgcggtgcgcgtggcccgtcggcgacgctccacgtgccggcgaacagatccttc
cttgtcgggccgaccacgttccacgggccttgcacttccgccagagtgacagtccaggtc
ttgggcacgattacagcgccgccttcgacgtcagccgcgtggaagtggagcgactattgg
ctcatgttccaacaggtccgcgggctcacggtgaccggcggaagcgccggcgtgctcgac
ggcagaggccagacttggtggcccaggaaatgcaaacgcaatggttgtcttgttgttgca
ccgacggccttgaagctggttagctgcgacggcctggagctgagctacttgagcagcaag
gatagcccgcagatgcacatcgtcgtgagcacgagcaggggggtgaacatgacccatctc
accatcaccgcgccgggggacagccccaacaccgacggcatccacctcgaccgctccgaa
ggcgtgcagatcaccggatcgacgatcggcaccggcgacgactgcgtctccatcggctcc
gggacccgcttcgtcaccgtcgacggactcgtctgcgggcctggtcacggcgtaagtgtg
gggagcctgggcaggaaaggatcaaacgcagcagtggagtacatcgatgtgagaaacgtc
cacttcatcaatacatcgaatggagcgaggatcaagacatggctgggtggacaaggctac
gcaagatccatctcattcaccgacataaaattcaccaacgtggaccatcctgtggtcatc
aaccagttttatgtagaccgtgccatccaatcgatggggggagtggcgatcaggaacata
acgtacaccaacctgaacgggacttcgagccagaaaacggccgtggcgtttgactgcagc
gagagcggcagctgcacggggatccacgtcaactccatggcgatcacggggacagatggc
caagcgaccgtagcccgctgccaaaacgtgcaaggagacacctccggaaacgtttctcca
cacatcccttgccttggctaa

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