Brachypodium distachyon (stiff brome): 100832348
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Entry
100832348 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100832348
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100832348
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100832348
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100832348
Peptidases and inhibitors [BR:
bdi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100832348
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100832348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100832348
NCBI-ProteinID:
XP_024316283
LinkDB
All DBs
Position
3:complement(42794547..42801443)
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AA seq
958 aa
AA seq
DB search
MGEKRKITSGEEAPERPQKAPRLDVLAEAGTESSAAAALLELSESPSAGKVEVAMSHSTS
EIERCEHLLLDSEDLDMLVFDIKAGEMLWTCQSYVCSHRGSSVGGKAMRMVCLDCHSTFC
TEHAQLHAKLTHHWVALVYDNPYVGYCYLCECVLKLGEDKWKEDDWEMATSKGTDEQGMV
ASNTKDEQRIVAGDDVCGYIIRGMPNLGSTCYMNAVLQCLLALGKLRTMILRPDARLGTI
GQYLQQLFVETSSGNDATCLLNPRMLLHCMRMYNQEFWGNRMQDSHDFLTSLRDALDEEV
KELNRLHCMQGGAVFPTIGQLIFKVQMCQTVSCKSCLNSAVQHVEFDDLQAAVAQPSKGP
PARSVAPAPRITSPRSPRKHRKKLFQQSDKNDGEKIQTIPGSGDSQIPGSELGDVTMEKN
PKPLQVDSNEAKDVVHDHFKTQKNDVPEEVIGVPIKVLDFIPKLFDDSDSEEMGALTIGL
RNPKDIGPPPLGNMEAKEYAFSVEVCEQDKGKPCKKLFQQSDKNDGEKIQTIPESGDSQV
PGSELGDLAMEKNPKPLQVDCTELKDVVHDQFKTQKNDVPGEVIGVTIKVLDFIPKLFDD
SDSEEMGASTIGFRNPKDIGQPSLRNIEAKEYAFSAEVTKEDKGKAQSSDIIHDVAEHIN
SLSSIEDCLALLLIDQPLEWTCGNCSKVNRTNNGEQMMANTNVNTAVGGDQTEQSDRKTC
PSEQSSELNSLSVGYSSPSRQPHGGCDAQGQLILSGDSTTEDTSGTSCGEKDSASKKPES
PEGVQEAVPKCLPTEKQTNQLSAQDSQDTSTQNQGCGTQVKLEEDQTEQKDGNCGATQTI
LLTNLPPVLTIQLKRFVGDISKLRGHVSFKEILNVGPFVHPSCVDKDNASYRLVGVVEHL
GPLLNGGHYIAYVRAGCNQQSSGSSSWVCANDHTITEVSLQEVLRCEAYILFYERMDG
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaagaggaagattacatcgggggaggaggcgccagagagaccgcagaaagcc
cctcgcctggacgtgctggctgaggctggtactgaaagcagcgcagcagcggcgctgctg
gagttgagcgaatcaccatcggcagggaaagtggaggtggcaatgagccacagtacttct
gagatagagcggtgcgagcacttattgttggacagcgaggatctggacatgcttgtgttt
gatatcaaggcgggcgagatgctctggacgtgccagagttatgtgtgcagtcacagagga
tcctctgttggcggcaaggctatgaggatggtgtgcctggattgtcattctactttctgc
actgaacatgcccagcttcatgccaagctcacccaccattgggttgctctggtgtatgat
aacccctatgttgggtactgctacctgtgtgaatgtgttctgaagcttggtgaggacaaa
tggaaggaagatgactgggaaatggcgaccagcaagggtacggacgagcagggaatggtg
gccagtaatacaaaggatgagcagagaatagtggccggtgatgatgtatgtggctatatt
atcagagggatgccgaatcttggatccacgtgctacatgaatgcagtgctgcagtgtctc
cttgcgcttggtaagctgaggacaatgattttacgaccggatgctcggttggggaccatt
ggtcagtacctgcagcagttgtttgtagagacaagcagtggaaatgatgccacatgtttg
ttgaacccacgtatgctattgcattgcatgaggatgtataatcaagagttctggggcaac
cgtatgcaagacagccacgattttcttacatctttgcgcgatgctttggatgaggaggtg
aaggagctaaacaggttgcattgcatgcaagggggtgcagtttttcctacaatcggtcaa
ctcattttcaaggtccagatgtgtcagaccgtatcctgcaaaagttgtttgaatagtgca
gttcagcatgttgaatttgatgatctccaggcagctgtggcacagccatcaaagggtcct
ccagccagaagtgttgcgccagcaccaaggatcacaagccccagatctccaaggaagcat
cgtaagaaactatttcaacaaagtgacaagaatgatggagaaaagattcaaacaattcct
ggaagcggcgattctcagattcctggttcagaattgggagatgtgaccatggagaaaaat
cccaagcctttgcaagttgattctaatgaagcgaaggatgttgtacatgatcattttaag
actcagaagaatgatgttccagaagaggtcattggggtgccaataaaagttcttgatttc
attcctaaattgtttgatgacagtgactctgaggagatgggtgcgctaacaataggtttg
cgcaatccaaaagatataggtccacctccacttggtaatatggaagccaaggagtatgct
ttctcagtagaagtttgtgaacaagacaaggggaagccttgtaagaaactatttcaacaa
agtgacaagaatgatggagaaaagattcaaacaattcctgaaagcggtgattctcaggtt
cctggttcagaattgggagatttggccatggagaaaaatcccaagcctttgcaagttgat
tgtactgaactgaaggatgttgtacatgatcaatttaagactcagaagaatgatgttcca
ggagaggtcattggggtgactataaaagttcttgatttcattcctaaattgtttgatgac
agtgactctgaggaaatgggtgcgtcaacaataggttttcgcaatccaaaagatataggt
caaccttcacttcgtaatatagaagccaaggagtatgctttctcagcagaagttactaaa
gaagacaagggaaaagctcagagtagtgatattattcatgatgtcgcagaacatataaac
tctctttcgtcgattgaggactgcctggcactgcttttgattgaccaaccgttagaatgg
acctgcgggaactgttccaaagtcaatagaactaacaatggtgaacagatgatggcaaat
accaatgtgaatacagctgttgggggagaccagacggaacagtcagacaggaaaacatgc
ccaagtgagcaatctagtgaattgaacagcttgtcagtaggatattcttctccaagcagg
caaccacatggtggttgtgatgcacagggtcaacttatactctctggggacagcactact
gaagatacttcagggacgagctgtggtgaaaaggactcagccagtaaaaaacctgaaagt
cctgaaggtgttcaagaagctgttcctaaatgccttccaactgagaaacagactaaccag
ttgagcgcccaggatagtcaagataccagcacacaaaatcagggctgtgggacgcaggta
aagctggaggaagaccaaactgagcagaaagatgggaattgtggtgcaactcaaacaatt
ttgcttaccaacctgccacctgtattaaccattcagctgaagagattcgtaggtgatatt
tctaaattgagaggacatgtgagctttaaggagattcttaatgtaggaccattcgtgcac
ccaagttgtgtggacaaagataacgccagctatcgtctagttggtgtcgttgagcacctt
ggtcccctcttgaatggagggcattacattgcttacgtgagggcaggttgcaatcagcag
agcagtggctcttcctcctgggtttgtgcaaacgatcacaccatcacagaagtctctcta
caagaagttctcaggtgcgaggcgtacatacttttctatgagaggatggatggctga
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