Brachypodium distachyon (stiff brome): 100832537
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Entry
100832537 CDS
T01717
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
bdi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100832537
03460 Fanconi anemia pathway
100832537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100832537
03036 Chromosome and associated proteins [BR:
bdi03036
]
100832537
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100832537
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100832537
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
100832537
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
100832537
FA (Fanconi anemia) pathway
Downstream FA components
100832537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
100832537
NCBI-ProteinID:
XP_014753535
UniProt:
A0A0Q3MEL1
LinkDB
All DBs
Position
2:complement(2810691..2822068)
Genome browser
AA seq
1551 aa
AA seq
DB search
MQRRWQVFAQPDGSLAWIPVAPPAPPPLPGRAAGSALPTVPAAAVAPAPAASGDDGALVE
ETLGAGGAEGARAASMKDILVQARNKMVEGDGMSEAIVDGGKDELFCTGSGRSVSVSERT
IRRARALVGDEAGETSNKRIKQPIGDGADLEGELGGMDVSFRGEGHNSSMSPVFQTGSGK
AVSLSKDSVQKARVILEDVGGVDSMEQFPLFQTGSGRAVSVSVASFQKAKSVLGENNTSG
GNTESFGRPDQPMMFQTGSGRPVMISEGPTESCRAAVLEEDAEKSGHCGTNCQFPMFQTG
LGRPVAVSRSSVQKARAVLEEQNIKETGHGDTSDCPTILQTETPRSVLMSSSLITNDRSV
TPKGDSTMQEKNHVDDDHLPLFQTGLGRSVAISKSSIKRASAVLEPRNIAKELEDEAHLH
GGHDGALVFKTGLGRTILASENSIKKVQVILEAQEEAKSVNNDNGEAYAEDATFQAGAQK
FVPQNGSSSHNASILFEQGSFAEKGYEDYGSQLPMFQTGSGKSVLISESSVQKARAVLEE
ECNMNRDNHKLLNSKDKKFHVFTSPLKTTCARTVNISSVGVSRAAALLGLEENTLSTQFF
GHVGEKLGTKITVERENPEQRLGTASVHGISGGCSMSSFPTENQVLKEPHMSFLLSNSTL
SDSGECPIRFSTAGGRSMAISSDALQRAKSLLGESELAVSKDDLVGHSSVSVSKDEIPSS
TLAWKEGDLDLPKISRAEGKTELSTFSHEAIPEKKHTGSFGYAVPDTLATKGNGNRFHVG
SHSISNIPKIPKPSSRCLSESDNASDTKDMARRLHMPSGALVDITNFMGEHSGNINHVNN
EKRRSVGRNSASPFKRPRSSRFIAPINTNKQSSTGVHKLPPTLITPCRTKLSACYPFQHK
RKTWKEYFGGRPCFNLSKEHLTDEVKLMDAKRAEKYTFDSLGTGAEEFQKMLLACGASST
YATKEWVSNHYKWIVWKLASLERCYPTKAAGKFLTVANVFEELKYRYDREVNNGHRSAIK
KILEGNALPSLMMVLCISAIHSRPGISKCKLEAGRADTNEDISGNKSLTAAHRNKSAQIE
LTDGWYALEASLDVALSEQLDKRKLSIGQKLRIWGASLCGWTGPVSFHEASGTVKLMVHV
NGSYRARWDDTLGFCKHVGPPLAFKCIKASGGRVPRTLVGVSRIYPVLYKEKLPDGRSVV
RSERMERKAVQMYHQRVSKITEDILCEQEENCGSTDDSEEGAKICKMLERAAEPEVMMAG
MTSEQMMSFSSYQEKQKVVRQNKVAKKVEKALEVAGLGPRDITPFLKLRVTSLVHKTTAT
KTTKEGLITIWNPTEKQKADLVEGQIYFVTGLVPCTYCTDILYLHARGPSTMWKQLASVQ
AKDFEPFFTPRKVVELSSFGDVPLASEFDIAGVVLHVGDVYLCSSQKRQWLFLTDGSKFI
SGQQSTEQNDCLLAVSFSCPIAGDDYAFFSYALSGNTVGFSNLVKRQKDQMRRLWVAEAT
ESTTYTISHEISKRSHLKEAATCAEKWASSSYPKIQELKERVLCIIGDSGG
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaggtggcaggtctttgcccagcccgacggcagcctcgcctggatccccgtc
gcgccgcccgctcctccgccgctgccggggcgcgccgcgggttcggccctgccgacggtg
cccgccgcggccgtagcccccgcccccgccgcctctggggacgacggcgcgctggtagaa
gaaaccctaggcgcgggcggcgccgagggagcccgtgccgcgtccatgaaggacatcctc
gtccaagctcggaataagatggttgaaggtgacgggatgtccgaagcaattgtggatgga
ggaaaggatgagctgttctgcactggatcggggagatcagtgtctgtcagtgagaggacc
ataaggagagccagagcgttagttggtgatgaggcgggggagacgagtaataagaggata
aagcaaccgattggtgatggcgctgatttagagggcgaattgggaggcatggatgtatca
tttagaggtgaagggcataacagtagcatgtccccagtgttccaaactggatcaggaaaa
gcagtctcgctgagcaaggactcagtccagaaggcaagagttattttagaagatgtggga
ggtgtggacagcatggaacagtttccattattccaaactggttcaggtcgagctgtatca
gtcagtgtggcatcttttcagaaagccaagtctgtcttgggggaaaataatacgagcgga
ggaaatacagagagttttggtaggcctgaccagcctatgatgttccaaactggttcagga
aggccagtcatgatcagcgaaggacccactgagagctgtagggctgcggtgttggaggaa
gacgctgaaaagagtggacattgcggtaccaactgccagttcccaatgttccaaacaggt
ttagggaggcctgttgctgtgagccggagctcagttcagaaggcaagggcagtattggag
gaacagaatattaaagaaactggacatggagataccagtgattgtcccacaattcttcaa
actgaaacaccgaggtccgttttgatgagtagcagcttaatcacgaatgatagatctgtc
acaccaaagggagatagtacaatgcaagagaaaaatcatgtggatgatgaccacttaccg
ttgtttcaaactgggttagggaggtcagttgcaataagtaagagctcaattaagagggct
agtgcagttctggagccaaggaacattgcaaaggaattggaagatgaagctcatttacat
ggtggccatgatggcgctctagtgtttaaaactggacttggaagaaccatcttagcaagt
gagaactctataaagaaagtacaggttattttagaggctcaagaagaagctaaaagtgta
aataatgacaatggagaagcctatgctgaagatgcaacgttccaagctggagcgcaaaag
tttgtaccccaaaatggaagttcaagtcataatgccagtatcctctttgagcaaggaagc
tttgcggagaaaggatatgaagactatggaagtcaactgccgatgttccaaaccggatct
ggaaagtcggtcttgattagtgaaagctcagtgcagaaggcaagggctgttctggaggaa
gaatgcaatatgaacagagataatcataagctccttaacagcaaggacaaaaagtttcat
gtctttacttcgcctctgaagacaacctgtgcaagaacagtaaatatatcttcagttgga
gtttctcgagctgctgctttgttggggttggaggagaataccctttcaacacaatttttc
ggacacgtgggagaaaagctaggtacaaagataactgttgagcgggaaaatccagaacag
aggcttggtactgcatctgttcatggaatttctggtggttgctccatgagttctttccca
acagaaaaccaagtacttaaggaaccacatatgtcatttctactttctaatagcactctc
tccgattctggtgagtgtcctatcagattcagtactgcaggtggcagatcaatggctatt
tctagtgatgcacttcaacgcgcgaaaagccttttgggtgaatcagaacttgcggtttcg
aaagatgatttagttgggcactcttcggtatctgtttctaaagatgagataccaagttca
actcttgcctggaaagaaggtgatcttgatttaccaaaaataagtagggctgagggcaaa
actgaattatcaacattttctcacgaagcaattcctgagaagaagcacactggttccttt
ggatatgctgtacccgataccctggcgaccaagggaaatggtaacaggtttcatgtgggg
agtcattcaatcagtaatatcccaaagatcccgaagccttcttccagatgtttatctgaa
tcagacaatgcaagtgacactaaggacatggctcgacgactccatatgccatcgggagca
ttggttgacatcactaacttcatgggtgaacattctggaaatatcaaccatgttaataat
gagaagagaagaagtgtgggaagaaattctgcatccccatttaaacggccccgctcatcc
aggttcatcgcgcctataaacaccaacaaacagtcctctactggagtacacaaactgcca
ccaactctgatcactccctgtcgaacaaagctttctgcatgttatccttttcaacataaa
aggaaaacttggaaagagtatttcggtggccgtccttgcttcaatctttcgaaggaacat
ctaacagatgaagtaaagctcatggatgcaaaaagagctgagaagtatacgttcgatagc
ttgggtactggtgcagaagaatttcagaagatgctgcttgcctgtggtgcttcgtcgaca
tatgcaactaaagaatgggtgagcaatcactataaatggatcgtgtggaaacttgcttca
cttgagagatgctatccaactaaagctgctggtaaattcttgacagttgctaatgttttt
gaagagctgaagtataggtatgacagagaagtgaacaatggccatcggtcagcaataaag
aagattttagaaggaaatgctttgccatctttgatgatggtgctgtgcatttcagctatt
cactctcgtcctggcataagcaaatgtaagttggaggctggtagagcagatacaaacgag
gacatcagtggcaataaaagcctgacagctgctcatagaaacaagtctgcacaaattgaa
ttaactgatggatggtatgccctagaagcttcattagatgtggcactttccgaacaacta
gataaaagaaagctttctatcggacaaaagcttcggatatggggagcttctttgtgtggt
tggactgggcctgtatcatttcatgaggcatctggtaccgtcaaattgatggtccatgta
aatggcagttatcgtgcaagatgggacgatactttggggttctgcaagcatgttggaccc
ccgctggcattcaagtgcataaaagcttccggtggccgagtccctaggacactggttgga
gtttcaaggatatatcctgttctgtacaaggagaagttgcccgatggtcgatctgttgtg
agatctgaaaggatggaaagaaaggcggtacaaatgtaccaccaaagagtatctaagatc
acggaagatattctgtgtgaacaagaagaaaactgtggcagtactgatgatagtgaggaa
ggggcgaaaatttgcaaaatgctagagcgggcggctgagcctgaagttatgatggcaggc
atgacttcagagcagatgatgtctttctcctcttatcaagaaaagcaaaaggtagttagg
caaaacaaagtggccaagaaggttgaaaaggcactggaagttgctggccttggtccaaga
gatattacaccatttttgaaattgagagtgacgagccttgttcataaaaccactgctaca
aaaaccaccaaggaagggctaataacaatttggaaccctaccgagaagcaaaaagccgac
ctggtggagggacaaatttattttgtcacaggactggtgccttgtacctattgtactgac
attctttacttgcatgctagaggaccatctacgatgtggaagcagttagcatcagtacag
gctaaagattttgaaccatttttcactccacgtaaggtggttgaactgtcatcatttggt
gatgtaccacttgcaagtgaatttgacattgcaggtgttgttttgcatgtcggcgacgtt
tatttatgtagcagccagaaaaggcagtggctctttttgacagatggatctaaatttatc
tcaggccagcagtccacagagcaaaacgattgtcttctagcagttagcttttcttgccca
attgctggtgacgactatgcatttttcagttatgccctttctggaaatacagttggtttc
agtaatctcgtcaagcgacagaaagaccagatgaggcgcttatgggtagccgaggcaaca
gagagcaccacctataccatttcccatgagatctccaaaagatcgcatcttaaggaagct
gcgacatgtgctgagaaatgggcttcaagttcttatcctaaaattcaggagctaaaggaa
agggttttgtgcataattggtgacagtggtggctga
DBGET
integrated database retrieval system
