Brachypodium distachyon (stiff brome): 100832621
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Entry
100832621 CDS
T01717
Name
(RefSeq) zinc finger CCCH domain-containing protein 25
KO
K13107
RNA-binding motif protein, X-linked 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100832621
Spliceosome [BR:
bdi03041
]
Complex B
Other components
RES complex
100832621
Complex C
100832621
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCCH
zf-CCCH_4
zf_CCCH_4
zf-CCCH_3
Torus
RRM_7
zf-CCCH_9
zf-CCCH_10
DIKK1-2-4_C-subdom2
RRM_5
DUF1866
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
100832621
NCBI-ProteinID:
XP_003563222
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All DBs
Position
1:complement(2160128..2170198)
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AA seq
385 aa
AA seq
DB search
MNPLTQVKRTQVINQKEAALGLSEDASWHAKFKDSAYVFVGGVPYDLTEGDLLAVFAQYG
EVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNLNGAKVLGRIIRVDHVDKYKKKEE
EDEDELQKKREERGVCYAFQKGECNRGDACRYSHDEQRNANTGWGSKEDINPKWEHDRHR
DPPNKGEFRGVCYAFQKGECSRGDSCRFSHDEQVAVQARGICYAFQKGECNRGASCRFSH
DEERNADAGRSSKEDRNARRDQDRHLDPPKSHKKFPSSAADQSFPDRTEEESRPANREGQ
SSRSEVYRDRDSRVKHGDRSTKDSDRRHEKSPERSRGERHRSDDRYMQEREERSESKRSR
NDRDSGGRYERRGDEEAERYGKSWR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccctgacgcaggtgaagcggacgcaggtgataaaccagaaggaggcggcgctg
ggcctcagcgaggacgcctcgtggcacgccaagttcaaggactccgcctacgtcttcgtc
ggcggcgtcccctacgacctcaccgagggcgacctcctcgccgtcttcgcgcagtacggc
gaggtggtcgatgtgaacctcgtgcgcgacaaggccaccggcaaatccaagggattcgcc
ttcgtcgcctatgaagaccagaggagcacggttcttgctgtcgataacctgaatggagct
aaagttcttgggaggatcataagggttgaccatgtggacaagtacaagaagaaggaggag
gaggacgaggatgagctgcagaagaagagggaggagcgcggcgtgtgctatgctttccag
aaaggcgagtgcaaccgcggagatgcgtgcagatactctcatgatgagcagagaaatgca
aacactggttggggttctaaggaggatatcaaccccaaatgggagcatgacagacaccgt
gatccaccaaataagggggagttccgtggcgtctgctacgctttccagaaaggtgaatgc
agtcgtggagattcctgcagattttcgcatgatgagcaggtagctgtccaggctcgtggt
atctgctatgctttccagaaaggcgagtgcaatcgtggagcttcctgcagattttcacat
gatgaagagagaaatgcagatgctggtcggagttctaaggaggacaggaatgcaagacgg
gaccaggacagacaccttgatccaccaaagagccataaaaaattcccctcaagtgccgct
gaccaaagtttccctgacaggactgaagaagagtcgagaccagcgaatagggaaggtcaa
tcttcaagatcagaggtgtacagagaccgagattctagggtgaaacatggtgatagaagc
acaaaagatagtgacaggcggcatgaaaaatctcccgagagatccagaggcgagagacac
agaagcgatgacagatatatgcaagaaagagaagaacgatctgagagcaagcggtcaagg
aacgacagagattctggtggccgttacgaaaggaggggtgatgaagaggcagaacggtat
gggaaatcgtggagatga
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