Brachypodium distachyon (stiff brome): 100832771
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Entry
100832771 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100832771 isoform X3
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100832771
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100832771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
Motif
Other DBs
NCBI-GeneID:
100832771
NCBI-ProteinID:
XP_010231974
UniProt:
I1HP18
LinkDB
All DBs
Position
2:42682400..42706525
Genome browser
AA seq
2434 aa
AA seq
DB search
MAALEREAALLARVAANHLFLAQFEPMRAALLSLRRRADPDLAADFLRAVVASGGRVPGV
LWSAPPACPSPSHLAWLAALELAALPSTPNPEALRLKAEFLILLQPIADYPTTGAEAQGT
LAKLLDLGVVRLKREVDGQGKAGVGAEEVPVSEEDLRGLSTVVLDNAELFDALCVGVSRQ
IGLDGGFGANVLLWLRRSVQLAHLDAVKALVMAGDVESAIGHLRFLCLENGVEEDEYKVV
LGDLVRKCWERASNYSGTWFESRNRITKMYGATLQSSSPQLVQLIQIILDGILSEEFEDH
SVSDAHWMPLPFKKFIETFWLERDADSDDRTILTAAITSCKKDLYHYSRLSGKHVLEVVM
ETALSLIKREQLQEAVNVVSLFPLLQPLVAVLGWDILKGKTSLRRKLMQLFWTSKSQTLR
LQEYSHYRTHTDETSCEEYLCDLLCFHLDLACFVSSVNSGHPWSLRNSLLFSQQEKDSDV
SAETLDPFVENMILERLAVQTPMRVLFDVVPGIKFQDAIELIGMQPLSSTTAASKRMHDI
ELMHMRYALQSVAFALGEMEKCAGHGNEHHYQMALSYLKEMQNFMDAIKNTPRKIFMVGI
VLSLLHMDDSIKLSQAAPSDSSVRHDYYDSITEPEGKNMVISFVGLLLDILRHNVQLKGS
GIDQLSSTGPLPAGRQALEWRLKHAKHSIEDLDWRLSVLQRLPPLSGQQWSWKEALVVLR
AAPSKLLNVCMQRANYGIGEEAVQRFSLPAEDKASLELAEWVAGAYNRALVEDAVNRATD
NTSAAQESDILSFRAQLGPLTTILLCIDVAATSARSGEMCRFLLDEATSLLSEIFPGSSP
KIGPAYWDQIQEVAIISVIKRILQRLSGILDLDGHPYLQVVFTEVSASLSTESSRVGQKQ
RPLGLLHQMIDDAFKGKRQFLNGKLHNVARAIVDEDSDKTYSKEGAKLEKKDVLISEKAV
VLGYGLRILKQASRTDPTASSVPESSQEPKGSTNRYLGPVSTKPSTYLSNFIIYIATIGD
IVDGTDTTHDFNYFSLVYERPKDLLTRLVFEHGSTDAAAKVADTMGVDFVHEIISACVPP
VLPPRTGQGWACIPILTTLSNIISENRSTVPKPLPADQGWSPHDSSLSSRRGPLYPLQLN
LVKHLAQLSSVRAVLACVFGSSILSGDNESSPTYVKDAMQAPEVERSFYEFALEQSERYP
TLNRWIQMQSNLHRVCESSVAVQTENEGALYQSKGKFSMKRAREPDSDAESELEDVVIHG
NAASSRPESPKRDDAKLEPTAFISFDWENEGPYEKAVERLINEGKLTDALAVSDRCLRNG
ASDKLLQLLIDQREERSLGTGQFRAYGSHILGSNTWQYCLRLRDKKLAAQLALKYLHNWD
LDAATNVLTMCICHLPENDPMRSKVLHMKQSLQRYGHIMSADDHYATWQEVEVDCEDDPE
GLALRLAAKGAVSAALQVAESASLSIDLRRELQGRQLVKLLTTDPLNGGGPAAASRFLSS
LRDSNDALPVAIGAMKLLPDLRSKQLLVHFFLKRTVGNLSDAEIARLNSWALGLRVLSLL
PLPSQQRCSSLHEHPQLILEVLLMMKQLQSASLVLKEFPSLRDDKLILSYATKAISVNVN
STIREPRLAISGSRAKQKKAAAPAKTNFVQSFGNFQREARKAFSWVPRDGGTKTPPKDIP
RKRKSSGSGGDRSSWEAMPGVQEERTPVYPSEGQDRIPFVSAPEEWVLTGDPDRDNTTRS
CHRYESSPDITLFKALLSLCNDESVAGKGALELCISQMKVVLSSLQLPLNASMDNIARAY
HATETYVQALSYAKNLLKRIVGNSDFSSGSERSRDADDVSVDASSSGTGSQYQDELSDLL
AQADTWLGRAELLQSLLGSGIIASLDDIANKESSTSLRDRLVDDERYSMAVYTCKKCKID
AFPVWVAWGHALVRMEHYAQARVKFKQALQQYKGDAPAVVLDIINTIEGGPPVDVSSVRS
MYEHLAKSAATIFDDSLSADSYLNVLYMPSTFPRSERSRQSRDSADSQFSSASSYLEDGP
RSNLDSVRYAECIHYLQEYARPQMLAFMFRHGHYADACSLFFPSNQPTAEGETSLSSNLR
SDPLTTEYGTIDDLCDLCLGYGAMSILEDTILAITQSPSYRDTTVIQYMNAVLTRICNYC
ETHRHFNYLYNFLVLKGDHVASGLCCIQLFVNSMSQEESLKHLGHAKTHFEEALSVRDRT
IEATKLVSRTARNKSASEKLTREMIMKFSTRVSYQMDVVKALNSVDGPQWKTSLFGNPTD
PETLRRRCMVVETLAEKHFDLAFRMLHEFDLPVVDIYAGVAASLAERKKGGQLTEFLKNI
RGTIEDDEWDQVLGASINVYANKHKERPDRLIDMLISNHRKVLACVVCGRLKSAFQIASR
SGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttggagcgggaggccgccctcctcgcccgcgtggccgcgaaccacctcttc
ctcgcgcagttcgagcccatgcgcgcggctctcctcagcctccgccgccgcgctgacccc
gatctcgccgcagacttcctccgcgcggtcgtcgcttcggggggccgcgtccccggcgtg
ctctggtcggctcctcccgcctgcccctccccctcccacctcgcctggctcgccgcgctt
gagcttgctgccctcccttccactcccaaccccgaggctctccgcctcaaagctgagttc
ctcatccttctccagcccatagctgattaccccaccaccggcgccgaggcccaggggacg
ctcgcgaagctgctggatttgggggtggtgaggctgaagcgtgaggttgacggacaaggt
aaagcgggggtcggtgccgaggaggtccctgtctctgaggaggatctgagggggctctcg
acggtggtcctcgataatgcggaactgtttgatgcactgtgcgtgggcgtttcgaggcag
atcggattggacgggggttttggtgcaaatgtgctcctgtggctgcgacgcagtgtgcag
ctcgcccacttggatgcggttaaggcgcttgtcatggctggtgatgtcgaaagtgccatc
ggacatctccgtttcctctgcctggagaatggtgtagaggaagacgagtataaggttgtc
ctaggagatcttgtcagaaagtgttgggaaagggcatcaaattattctggaacatggttc
gagtcacgtaataggataactaaaatgtatggagcaactcttcagtctagcagtccccag
cttgttcaactgattcagatcattctggatggcatcctttctgaagaatttgaagatcac
agcgtctctgatgctcattggatgcctcttcctttcaaaaagtttattgaaacattttgg
ttggagagggatgctgattcagatgacaggaccatcttgactgcagctataacatcctgc
aagaaagatttgtaccattattctcgactctctggaaaacatgtccttgaagttgtcatg
gaaactgctctatctttaattaagagagaacaacttcaagaagctgttaatgttgtctcg
ttatttcctcttctccagccattggttgctgtcttgggttgggatattctgaagggtaaa
acatctctgcggagaaagctaatgcagttgttctggacaagcaaatcccaaactctgcga
ctacaagagtattcacattaccgtacacacacagatgagacatcctgcgaagagtacttg
tgcgatcttttatgctttcatctggatcttgcatgcttcgtttccagcgtgaattctggg
cacccttggagtttgaggaattcattattgttctcccaacaagagaaagattcagatgtt
agtgccgagacattggacccctttgttgagaacatgatacttgagcggttagctgttcag
actcccatgagagtactgtttgatgtggtcccaggaataaaatttcaagatgcaattgag
cttattggtatgcagccactttcttcaacaactgcagcttcaaagaggatgcacgacatt
gagctgatgcacatgcgatatgctcttcagtcagttgcctttgctttaggagagatggag
aagtgtgcaggtcatgggaatgagcaccactatcaaatggctttgtcatatttaaaagag
atgcaaaattttatggacgctataaaaaatactccacggaagattttcatggtcggcatt
gtattgtcattgttgcatatggacgacagcatcaaattgtcgcaagcagccccttcagat
agttctgttcgtcatgattactatgatagtattaccgaacctgaagggaagaacatggtg
atatcttttgttgggcttctgcttgacatacttcgtcataatgtccaattaaaaggctct
ggtattgatcagctgtcaagtactggtccattgcctgctggcagacaagcattagaatgg
agactcaaacatgccaaacattccattgaagacttggattggcgtctatctgttctacaa
cgccttccacctctgtctgggcaacaatggagttggaaggaggcattagtagttttacgt
gctgctccctcaaaattattgaacgtatgcatgcaaagggcaaactacggtataggagag
gaagcggtacagcggttttctttgcctgctgaggataaagcttctcttgaactagctgaa
tgggtagctggtgcatataatagagcactggttgaggatgctgtaaaccgtgccaccgac
aacacaagtgctgcacaggaatcagatattttgtcatttcgtgctcagcttggtcctcta
actacgattctgctttgcattgatgttgctgcaacttctgctaggtcaggagagatgtgt
cgatttcttcttgatgaagccacaagtttgttgtctgaaatatttccaggaagctcccca
aaaataggccccgcttattgggatcagattcaagaagttgctatcatatcagtgataaag
cgcatccttcagcggctgagtggcatcttagatctggatggtcatccatatcttcaagta
gtttttacagaagttagtgcctctttgtcaactgaatctagcagagttgggcaaaagcaa
cgtccacttggactcctgcatcagatgattgatgatgccttcaaaggaaagcggcagttc
ttgaatggtaagctccacaatgttgcgagagctattgttgatgaggattctgataaaact
tattcgaaagaaggtgccaagttagaaaagaaagatgttttgatatctgaaaaggctgta
gtccttggctatggactcagaatcctgaaacaagcatctagaactgacccaacggcttca
agtgttcctgaaagcagtcaagaacccaaaggttctacgaacagatacttgggtcctgta
tctaccaagccatcaacatacttatcaaacttcataatatacattgctacaattggtgat
atagttgatggaactgacacaactcatgatttcaactacttctcattagtatatgaacgg
ccaaaagatcttttgactcggttagtttttgagcatggaagtactgatgcggctgcaaag
gtagctgacacaatgggtgttgattttgtccacgagataatatcagcctgcgtgccacca
gttcttcctccacgaacaggacaaggatgggcttgcattcctattttaactaccctttct
aatattatttcggaaaacagatcaacagtcccaaagcccctccctgctgatcaaggatgg
agtccacatgactcatcattgtcttctcgtcgggggcccctctaccctcttcagttaaat
ttagtgaagcatttggcccaattatcatcagtaagagcagttttggcatgtgtttttgga
agtagcatactatctggtgacaatgaatcatctcctacttatgtgaaagatgcaatgcaa
gcccctgaagttgagaggtcattctatgaatttgctctcgagcaatcagagagatatcca
accttgaaccggtggatacagatgcagtctaaccttcaccgggtttgtgagtcttctgtg
gcagttcagactgaaaatgaaggtgccttgtatcaatccaaaggaaaattttctatgaag
cgagctcgtgaacctgacagtgatgctgaatctgagcttgaagatgttgtcatacatgga
aatgccgcttcaagtagaccagaatctcctaaacgtgatgatgctaaactagagccaaca
gcttttatttcatttgactgggagaatgaaggaccatatgagaaagctgtcgagaggcta
attaatgaaggaaaactaactgatgctcttgctgtatctgaccgctgtttgcgcaatgga
gcatcggataaattgcttcagttgcttattgatcaaagggaagaaagaagtttaggcaca
ggacaattccgcgcatatggatctcatattttggggagtaatacttggcagtattgcttg
agactgagagataaaaagcttgcagctcagcttgctctgaagtacctacacaattgggac
cttgatgctgcaactaatgttctaactatgtgcatctgccacttacctgagaatgatccg
atgcggagtaaggtgctacacatgaagcaatctcttcagcggtatggtcatattatgagt
gctgatgaccattatgctacatggcaagaggttgaagttgattgcgaagatgatccagag
ggcttagcacttaggcttgctgccaaaggagctgtgtctgctgctttgcaggtcgctgaa
agtgcctctttgtcaattgatctgcggagggaactgcaaggtcgccagctggtcaaactt
ctaaccaccgatccacttaatggtggaggcccagccgcggcttcacgatttctatcatcc
ttacgagattccaatgacgctcttcctgttgctattggtgctatgaagttattacctgac
ttgcgctcaaagcagctcctagtgcacttttttctcaaacgtacagttgggaatttgtcc
gatgctgagattgctagacttaattcatgggcattaggtctccgtgttctttccttattg
ccactaccgtcacaacagcgatgctcttctctgcatgaacatcctcagttgattctggaa
gtactactgatgatgaagcaactacagtccgcttctttggttttgaaagaatttccatcc
ctaagggatgacaaattgattctttcttatgctacaaaagcaatctcagtcaatgttaat
tctaccattagggaacctcgactagccatctctgggtcaagagcaaaacaaaaaaaggct
gccgcgccagctaaaacaaattttgtgcaaagttttggtaactttcagagagaggcacgc
aaagcattctcatgggtgccccgtgatggtggcaccaaaactcccccaaaagacattccc
cggaaaagaaagagttcaggctcaggaggtgatagatcctcttgggaagcgatgcctggt
gtacaggaggagcggactcctgtatacccttctgagggacaagatagaattccttttgtt
tctgctcctgaggagtgggtgcttactggagaccctgatagggataatacaactcgttct
tgtcatagatatgaatcctctccggatatcaccctattcaaggcattgctttcactgtgc
aacgatgaatcagtagctggaaaaggggcacttgaactgtgtattagtcagatgaaagtt
gtactaagctccctacaattgcctcttaatgcatctatggacaacatagcccgggcttat
catgcgacggaaacttatgtgcaggcactctcttatgcaaaaaatctactaaaaaggatc
gtgggaaatagtgatttttcaagtggctctgaaagaagtagagatgctgacgatgtttct
gtggacgctagcagttctggcactgggagccaataccaagatgagctttctgatcttctg
gctcaagcagatacgtggttagggcgtgcagaacttcttcaaagcctgctgggatcaggt
attattgcctcacttgatgatatcgcgaacaaagaatcttcaactagtctacgtgacagg
ctagttgacgatgagcgatacagcatggctgtatatacttgtaagaagtgcaagattgat
gctttcccagtgtgggttgcatggggccatgctttagttcgaatggaacactatgctcaa
gcccgtgtgaaatttaagcaagctcttcaacagtacaaaggtgatgcacctgctgttgtc
cttgatatcattaacacaattgaaggaggtcctcctgtcgatgtttcttctgtacgctct
atgtatgaacacttggcaaaaagtgcagcaactatctttgatgattccctctctgctgat
tcttatcttaatgtcctatatatgccatccacatttccacgatctgagaggtccaggcaa
tctagagattctgcagatagccaattttcatctgctagctcataccttgaagatggtcct
cgcagcaatcttgatagtgtccgatatgcagagtgtattcattacttgcaagaatatgct
cgcccgcaaatgcttgctttcatgttcaggcatggtcattatgctgatgcatgctctcta
ttctttccgtccaatcaaccaaccgcagaaggggaaacatctttgtcatcaaatctacga
agtgatcctctaacaactgaatatgggacaattgatgacttgtgtgatctttgtcttgga
tatggtgctatgtctattttggaggatacaatattggcaataactcaatcgccgtcgtat
cgtgacacaactgtgattcaatacatgaatgctgttctcactcgcatttgtaactattgt
gagacacatcgacactttaattatctctacaactttctggttctaaaaggtgaccatgtt
gcttctggcctttgctgtattcaattattcgtgaattcaatgtctcaagaggaatctctg
aagcatttaggacatgccaagacacattttgaggaagccttatctgtacgagatagaaca
attgaggctacaaagttggtatcaaggactgctcgtaacaagagcgcatcggaaaaattg
actagagagatgataatgaaattttctactcgggtttcctatcagatggatgtagtgaag
gccctcaacagtgtagatggtcctcagtggaaaacctctctttttgggaatccaactgac
cctgaaactctgaggcggaggtgcatggttgtcgaaactcttgctgaaaaacattttgat
ttagcttttagaatgcttcacgagtttgatcttccagttgttgatatttatgccggtgta
gcagcatccctcgcagagaggaaaaaaggtggccaattaacggagttcttgaagaacata
agagggaccatagaggatgatgaatgggatcaggttcttggtgcttctataaatgtttat
gctaacaagcataaagaaaggccagatcgacttattgacatgctaatcagtaatcacagg
aaagtacttgcttgtgttgtttgtggccgtctaaaaagtgcattccaaatagcctcacga
agtggaagtgtagctgatgttcaatatgttgcccatcaggctttacatgcaaatgcatta
ccagttcttgatatgtgcaaacaatggctggctcagtacatgtaa
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integrated database retrieval system
