Brachypodium distachyon (stiff brome): 100832822
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Entry
100832822 CDS
T01717
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
KO
K14963
COMPASS component SWD3
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100832822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100832822
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
100832822
NSL complex
100832822
HMT complexes
COMPASS/SET1 complex
100832822
COMPASS/SET1 complex (yeast)
100832822
MLL-HCF complex
100832822
MLL3/MLL4 complex
100832822
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100832822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SPT8
eIF2A
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
WD40_like
Ge1_WD40
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
PROPPIN
DUF7165
Beta-prop_NUP159_NUP214
WDR54
Nucleoporin_N
Beta-prop_VPS8
DUF5570
VPS8_N
DGKI
Motif
Other DBs
NCBI-GeneID:
100832822
NCBI-ProteinID:
XP_003560407
UniProt:
I1GNT9
LinkDB
All DBs
Position
1:complement(7345537..7350251)
Genome browser
AA seq
323 aa
AA seq
DB search
MAAPAADDPLASPGYALRATLTGHTRAVSAVKFSPDGRLLASASADKLLRVWSSSDLSLV
AELVGHEEGVSDLSFSPDGRLLASASDDRTVRIWDLGSGGGARLVKTLTGHTNYAFCVSF
SPHGNVLASGSFDETVRVWEVRSGRSLRVLPAHSEPVTAVDFDRDGAMIVSGSYDGLCRI
WDAATGHCVKTLIDDESPPVSFSKFSPNGKFVLASTLDSTLRLWNFSAGKFLKTYSGHVN
TKYCIPAAFSITNGKYIVSGSEDNCVYMWDLQSRKIVQKLEGHTDTVIAVSCHPTENMIA
SGALDSDKTVKVWVQKDEEKQGS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggcggcagatgaccctctggcctccccgggatacgccctccgcgcgacg
ctcacgggccacacccgcgccgtctccgccgtgaagttctccccggatggccggctcctc
gcctccgcctccgccgacaagctcctccgcgtctggtcctcctcggacctctccctcgtc
gccgagctcgtcggccacgaggagggcgtgtccgatctctccttctcccccgacggacgc
ctcctcgcatccgcctccgacgaccgcaccgtccgcatctgggacctcggctccggcggc
ggcgcccgcctcgtgaagacgctaaccggccacaccaactacgcgttctgcgtctctttc
agcccccatggcaacgtcctcgcctcggggtccttcgacgagacggtgcgcgtgtgggag
gtcaggtcgggacggagccttcgcgtgctgccggcccactccgagcccgtcaccgccgtc
gattttgaccgcgacggggccatgatcgtgtcagggagctatgacgggctctgccgcatc
tgggacgcagccaccggacactgcgtcaaaaccctcattgacgacgagagccccccagtg
tccttctccaagttttcgcccaacggcaagttcgtgcttgcctccacacttgatagcacc
ctgaggctctggaatttctcagctgggaagtttctaaagacgtattctggccatgtgaac
acaaaatactgcattccagcagcattttctatcaccaatggcaagtacattgtcagtggt
tctgaagacaactgtgtctacatgtgggatcttcagtcaagaaagattgtgcagaaactg
gaaggacacactgacacagtcattgctgtgtcatgccaccctaccgaaaacatgattgcg
tcaggagcgcttgacagcgacaagacggtgaaagtttgggttcaaaaggacgaagagaaa
caaggttcctga
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