Brachypodium distachyon (stiff brome): 100832902
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Entry
100832902 CDS
T01717
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
KO
K14962
COMPASS component SWD2
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100832902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100832902
03036 Chromosome and associated proteins [BR:
bdi03036
]
100832902
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100832902
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
100832902
COMPASS/SET1 complex (yeast)
100832902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
PQQ_3
PQQ_2
Nup160
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
100832902
NCBI-ProteinID:
XP_003577607
UniProt:
I1ILY8
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All DBs
Position
4:complement(23013709..23019920)
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AA seq
330 aa
AA seq
DB search
MPRGEKEERVTMEVTDEVLKIMEVGLAFRDYNGRISSMDFHSRATNYLVTASDDESIRLY
DIQNATCLKTINSKKYGVELVCFTTNPTLVLYSSKNGWDESLRLLSLNDNRFVRYFKGHL
DRVVSMSLCYEKDNFISGSLDRTVLLWDLRADKAQGLLRVQGRPAVSFDNQGLVFAVAYG
GYVRMFDARKFEKGPFDIFSVGNDDSEAHVIKFSSDGRRLLLTTKAGRIHVLDSFHGNNI
ATYSVKPVLGNSTLEASFSPDGNHIISGSGDGTVYAWSVRSGKVARWGSTDNEPPLVRWA
PGSLMFLTGSSELSCWVPDLSKLGSFAVTK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtggtgagaaggaggagagggtgaccatggaggtcaccgatgaggtgcttaag
atcatggaggtcggattggcctttcgggactataatggaagaattagttctatggatttc
cacagcagagctacaaattatcttgtgacagccagtgatgatgaatcaatccgcctatat
gacattcaaaatgccacatgtttgaagaccattaatagcaaaaagtatggggttgaactg
gtatgcttcaccactaacccaacacttgtcttgtattcttcgaaaaatggctgggatgaa
tctctccgtctactctcgctgaatgataaccgatttgtaagatattttaagggtcatctt
gacagggttgtttctatgtcattatgctacgagaaagacaattttatctctggttcactt
gatcgaactgttctcctttgggatctgagggctgacaaagcacagggcttattacgcgtg
caaggcaggcctgcagtttcatttgataatcagggtttagtttttgctgttgcatacggt
ggttacgtaaggatgtttgatgctcgaaaatttgagaaggggccttttgatattttctcc
gttggtaatgatgattcagaagcccatgtaataaagttcagcagtgacggaaggcggctt
cttttaaccaccaaagctgggcgtattcatgtgctagattcattccatggcaataatatc
gcaacttacagtgttaagccagttttaggtaattcaacattagaggcatcattcagccct
gacggaaaccacatcatatctggctctggggatggcactgtttatgcttggagtgttaga
agcggaaaggttgcacgctggggaagcacagataatgagccaccacttgttagatgggct
ccaggatcgttgatgttcttgactggatcttcagaactatcctgctgggtcccagatcta
tccaagctgggatcgtttgccgtcactaagtaa
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