KEGG   Brachypodium distachyon (stiff brome): 100832981
Entry
100832981         CDS       T01717                                 
Name
(RefSeq) cyclin-T1-1 isoform X1
  KO
K15188  cyclin T
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100832981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdi03021]
    100832981
Transcription machinery [BR:bdi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     100832981
    Brd4/P-TEFb complex
     100832981
    7SK RNP complex
     100832981
SSDB
Motif
Pfam: Cyclin_N TFIIB CycT2-like_C Cyclin_C
Other DBs
NCBI-GeneID: 100832981
NCBI-ProteinID: XP_010233768
UniProt: I1HWW9
LinkDB
Position
3:complement(1932008..1936189)
AA seq 616 aa
MAPAAAAGEEGGGGRGRSWYLTKEEVEAGSPSRKHGVTKDKEDRIRGIYCSFMRDVGGVL
KLPQITVATAIMLCHRFYLLQSHVKNEWQTIATACILLASKIEDTPCSLKRVVIAAYETM
YRRKPDTARRIHEKEFLEKRKSLVVVGERLLLSTIRFDFNIQHPYGPLNCALENLGISQK
EVQQAAVNLIHDALRSTLVVQFKPHYIAAASLFLAAKREGFKLPLGKGKVWWQQFDVAPQ
QLEAAVSQMREVCVKRKPGPTVPAVRPTPDPTPVEKQPEMNFPKPVLKYVYSRRPQSRPA
PAGTPTLVEKQQIISTVDPVLRPTQSSGGDLSRPTAVPTATPTLVEKEQIIRSVGAVLKP
TNSSGGGPSEPTAVPTATPDVVEKQQIISTPDSVLRHADPSRGGLSRHTTAPTVTPETST
LAKKQQKISTPDSVLRHTHPSKGGLSRPTTSATRDSTLVKKQQVVSTLESVQSHAHPSRR
GLTSNNFDREAPRRMGVDRLVHHNSTGSSVRNGSNKPLPRNEDNKPLRRHMDLGSNRTVR
DERSEKQSSQSALKADHVHGEQKDIDVARVRKRRIQEDGEHPTPVDRSDQDSWTGQHIQS
VMVVEPKLPSLKRHKI
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggcgccggcggcggcggcgggggaggaggggggaggagggaggggccgttcatggtat
ttgaccaaggaggaggtcgaggcagggtcgccgtcgaggaagcatggggtgacgaaggac
aaggaggatcggatccggggaatatattgctctttcatgcgcgatgtaggcggcgttctc
aagctgccccagatcacagtcgccacggccatcatgctctgccaccgcttctacctcctc
cagtcccatgtcaagaacgagtggcagactatcgcaactgcttgcatacttcttgcatcg
aagatcgaagacacaccttgctcattgaaacgtgtcgttattgcagcatatgaaacaatg
tatcggagaaaacctgatactgcccgtagaatccatgagaaggagtttctcgagaagcgg
aagtccctagttgtggtaggggagagactattgctttcaaccattaggtttgatttcaac
atacagcatccttatggtccactaaactgcgctctcgagaatctggggatctcccagaag
gaagtgcaacaggctgcagtaaatctcattcatgatgcgcttcggtctacattggttgtg
caattcaaaccacactacatagctgccgcgtctctctttcttgctgctaagcgtgagggt
ttcaaacttcctcttggaaaaggaaaagtatggtggcaacagtttgatgttgctccacag
cagttggaagctgctgtttctcaaatgagagaagtttgtgtgaaaagaaagccaggcccg
acagttcctgctgtcaggcccactccagatcctactccggtggaaaagcagcctgaaatg
aactttccgaagcctgttctgaagtatgtatactcaaggagaccccaaagcaggcccgct
ccagctggaaccccaactcttgtggagaagcaacagataataagcaccgtggaccctgtt
ttgaggcctacacagtcttcagggggagacctaagcaggcccactgcagttccaactgca
actcctactctggttgagaaagagcagataataaggagcgtgggtgctgttttgaagcct
acaaactcttcaggtggaggtccaagcgagcccactgcagttccaactgcaactccagat
gtggttgagaaacagcagatcataagcaccccggactctgttttgaggcatgcagaccct
tcaaggggaggcctaagcaggcacaccacagctccaactgtaactccagaaacttcaact
ctggcgaagaaacagcagaaaataagcactccggactctgttctgaggcatacacaccct
tcgaagggagggttaagcaggcccactacttctgcaactcgagattcaactctggtgaag
aaacagcaggtagttagcaccctggagtctgttcaaagccatgcacacccttcaaggaga
ggcctaacaagcaataacttcgatagagaggctcccaggcgtatgggtgtggaccgtttg
gttcatcacaattccactggcagctcagtgaggaatggaagtaacaagccacttccaagg
aatgaagataacaagccactgcgtaggcatatggatctaggctccaatagaactgtgagg
gatgaaaggtcagagaagcaatcttcccaatcggcactaaaggctgatcatgttcatggc
gaacagaaagatatagatgtggcgagggttaggaagagaagaattcaggaggatggagag
catccaactccggttgatagatctgaccaagattcttggacggggcagcatattcaaagt
gtgatggttgttgaacctaagttgccatctttgaagaggcacaagatctag

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