KEGG   Brachypodium distachyon (stiff brome): 100833037
Entry
100833037         CDS       T01717                                 
Name
(RefSeq) RING-H2 finger protein ATL78
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bdi04121]
    100833037
Enzymes [BR:bdi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100833037
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    100833037
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-ANAPC11 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf_RING_Vps8_fungal zf-RING-like Prok-RING_1 SLX1_C FANCL_C zf-RING_4
Other DBs
NCBI-GeneID: 100833037
NCBI-ProteinID: XP_010239893
UniProt: I1IXN0
LinkDB
Position
5:13283097..13284130
AA seq 199 aa
MYARRTLLHAFSGQPSGPSQPVAATSATDDGAPGSNFDANVVMILAVLLCALICVLGLNS
IVRCALRCSSRVVVDSEPNLVARLAKGGLRRKALRAMPILVYSARLRLSTASPLCAICLS
DFEPGEHVRVLPKCNHGFHVRCIDRWLLARSSCPTCRQSLFEAPQKTGGCYEVSRTEPVQ
LQSVLVPLRPEGLVTAYDF
NT seq 600 nt   +upstreamnt  +downstreamnt
atgtatgcaagaaggacactgctgcatgcattctctgggcaaccctctggtccgagccag
ccagtggctgcaacctcggcgactgatgatggcgctccgggaagcaacttcgatgcgaac
gtcgtcatgatcctagctgttcttctctgtgcattgatttgcgtactcgggctcaactcg
atagtccggtgtgcactgcggtgctcgagccgggtggtcgtggactctgagccaaatcta
gtagcacggcttgctaagggtggactgaggaggaaggccctccgagccatgccaatcctg
gtatactcggctaggttgaggctcagtactgccagcccgttgtgcgcgatttgcctctcg
gattttgagcccggggagcatgtaagggtcctccccaagtgcaaccatggtttccatgtc
agatgcattgataggtggctcttggcgcggtcgtcgtgccctacatgccgccaatccttg
tttgaggcgccacagaagactggtggctgctacgaggtgagccggaccgagccagtgcag
ctccaatctgtactggtgccactcagacctgaaggtttggtcactgcatatgacttctag

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