Brachypodium distachyon (stiff brome): 100833136
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Entry
100833136 CDS
T01717
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100833136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100833136
Spliceosome [BR:
bdi03041
]
Complex A
Other components
Complex A specific factors
100833136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
zf-CCHC
eIF3g
KH_12
PHD_4
RRM_5
KH_PNO1_2nd
DUF6319
RRM_Nup35
RRM_7
Motif
Other DBs
NCBI-GeneID:
100833136
NCBI-ProteinID:
XP_003579604
UniProt:
I1IX23
LinkDB
All DBs
Position
5:10501754..10506025
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AA seq
749 aa
AA seq
DB search
MASTETLARSPSREPTSDPPRDAPPRDASSEPQHNGSGSAAAEGDSSSRRRRRSRWEQSN
DDSGANSGGEGGAGRKRKSRWAEEEPRPTIALPDFMKDFAAEMDPEVHNLNSRLLEISRL
LQSGLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLNRERQEIISQLIRRNPAFK
PPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEG
KLLQKRDLKPDPSENEDLHVLVEADTPEALEAAAGMVEKLLTPVDEVLNEHKRQQLRELA
ALNGTIRDDEFCRTCGEPGHRQYACPNRTTTFKSEVQCKICGDGGHPTIDCPVKGTSGKK
MDDEYQNFLAELGGSAPESMTKSGGPMLAITGSSGGGGGNSGSNLPWAGGGGVSATGANG
IKKDYDETNLYIGYLPPMFDDSGLINLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYSDVS
QANAAIAAMSGYHLEGRTIAVRVAGKPPQPAVPTGPPAVPAPPMYHTADTSGGGYNSQPY
MGGHPPPPPGSYAPVPWGQPPPYASYPPPPPPGMYNPAPAPPGQTAPPPYGMQYPPPPAP
IPPPGTAPSSDGLQNYPPGVTPPSSGAPTQPVPAPVYGTSGAQNVPHMYPPPPYSYAPYY
PTVTPVQQPPPPPPNVDPSQSIATAPWATHNAPPPPPPPVSVDPSQNIASAPWATNSAPP
PPPLPSSNEHPTAPYGADAEYDKFMSEMK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaccgaaaccctagcccgctctccatctcgcgagcccacctccgacccaccc
cgcgatgccccgccgcgtgacgcctcctccgagccccagcacaacggatctggcagtgcc
gccgccgagggcgactcatcctcccgccgccgccgccgcagccgatgggagcagtccaac
gacgactccggcgctaactctggcggcgagggcggggcgggacggaagcggaagtcacgg
tgggcggaggaggagccccgcccgaccatcgcactcccggacttcatgaaggacttcgcc
gccgagatggatccagaggtgcacaaccttaactcgcgcctcctggagatctcgcgcctg
ctgcagtcggggctccccctcgatgaccgccctgagggcgcgcgctcgccgtcgcctgag
cctatatacgacaacctcggcatccgtatcaacacccgcgagtaccgtgctagagagcgc
ctcaaccgagagcggcaggagatcatctcccagctcatccgccgcaaccccgccttcaag
ccgccggcggattaccgcccgcccaagcttcacaagaagctctacatccccatgaaggag
taccccggctacaacttcattgggctcatcattggaccccgtggcaacacacagaagcgg
atggagaaggagacaggggccaagattgtaatccgagggaaaggcagcgtcaaggaaggg
aagctgctgcagaagagggacctcaagccagatcccagtgagaatgaggaccttcatgtt
cttgttgaggctgatacaccggaggcattagaagcggctgcaggcatggtggagaaactg
cttactcctgtggatgaggtgctgaatgagcacaaacgtcagcagttaagggagcttgca
gcgctgaatgggacaattagggatgatgagttttgtaggacttgtggagagccgggacac
cgacagtatgcttgcccaaataggacaacaacgtttaagagcgaggtccagtgtaagatc
tgtggcgatggtgggcacccgacaattgattgtccagtcaagggcacatctgggaagaag
atggatgacgagtaccagaacttcctggctgagcttggtgggagtgcacctgaatcaatg
acgaagtctggtggtccaatgctggctattacagggagtagcggcggcggcggcggtaat
agtggcagtaacttgccatgggctgggggtggtggtgtttcagcaacaggggcaaatggg
atcaagaaggattatgacgagacgaatctttacattgggtacttgccacctatgtttgat
gattcagggctcatcaacctattttcacagtttggggagattgtcatggcaaaggttatc
aaggatcgcaacactgggcagagtaaaggatatggatttgtgaaatattcagatgtctcg
caggctaatgcggcaattgctgcgatgagtggttaccatcttgaaggtaggactatcgca
gttagagttgcaggcaagccaccacagccagctgtccccaccggtccaccagcagtgcca
gcaccaccgatgtaccacactgcagatacatctggtggtggctacaattcgcagccctac
atgggaggacatccaccaccacctccaggtagctatgctccagtgccttgggggcaacca
ccaccatatgcttcgtaccctccaccgccaccaccaggcatgtacaatcctgcacctgct
ccaccagggcagaccgctccacctccatatggtatgcagtacccgccaccaccagctccg
atccctccaccaggcactgctccatcaagtgatggattgcagaactaccctcctggtgta
acgccaccgagttctggtgcacctactcagcctgttccagctccggtatatggaacctct
ggtgcacaaaatgtcccacatatgtacccaccaccaccttatagttatgcaccatattat
ccaactgtcacaccagttcagcagccgcctccaccaccgcctaatgttgatccctcgcaa
agcattgcaactgcaccttgggccacccacaatgcaccaccaccaccgccaccaccggtt
agcgttgatccttcacagaacattgcaagtgcaccatgggccaccaacagtgcaccaccg
ccaccacctttgccatcctccaatgaacatcctactgctccctatggtgctgatgcagag
tatgataaatttatgtcagagatgaagtga
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