Brachypodium distachyon (stiff brome): 100833381
Help
Entry
100833381 CDS
T01717
Name
(RefSeq) protein HASTY 1 isoform X2
KO
K14289
exportin-5
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100833381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100833381
03036 Chromosome and associated proteins [BR:
bdi03036
]
100833381
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100833381
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
100833381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
100833381
NCBI-ProteinID:
XP_003567678
UniProt:
A0A0Q3IUZ0
LinkDB
All DBs
Position
2:complement(11182840..11197784)
Genome browser
AA seq
1190 aa
AA seq
DB search
MSTDLAAASAVAAISAVMDWRSSPDARNAAFTYLESVKSGDVRALASTSFLLVRKDQASE
IRLHGFKMLQHLVRLRWEELSVAERNEFANLTVNLMSEVIGPREEWALKSQTAALVAEVV
RREGVTLLNTLLPSIVSLSNSGPAEAELVAMILRWLPEDITVHNEDLEGDKRRALLRGLT
EALPQILPLLYSLLEKHFVAASSEHTKQQMELAKQHVGTVIAVLNAVNAYAEWAPVTDLA
KYGLIHGCGSLLSYSDFRVHACEFFKIICQRKRPVDVAISEYDAAMSNIFQVLMSVSQEF
LTKSRMQPSAIDDSEYEFAVCICETMVALGSSNMQCILADGARTSHFLQQMLEYYQHDRI
ALHFQSLLFWLVVLREPSKAKSVARVSGDTTSGSSTEKEKKGVLLFITDEIYSTLLDVAF
KRMLKKSASSSPSPLELWNEELEGKSDFSNYRTKLLDLIRVVASQRPVIAAANAVQRISV
VFGDTNEATKSPEVLDAMVGAQLGLETVVSAIFDGSGDYTKTDQEIQFQIHSTFEGLLQQ
LLSLKWTEPSLAVIHGHYLDSLGLFLRHYPDAVASVVNKLFELLTSLPITIQDLSNNSRQ
ARLQICSSFIRISRAADKALLPHMKNIADTMAYLQGEGRLLRAEHDHLCEAFLIMASSSG
IQQQQEVLAWLLEPLNKTWTQMEWQTAYLSDPSGLTHMFADSQFMWSIYHNVTFFEKALK
RSGTKKSTAALQAAPTTTAVTGYLHPMSSHLSWILPPLLRLLRCIHALWAEPFAQSLTGE
TKAAKSMTIAEQASLLGETNKLTKGQVAPSDGLLDVQREGESKENNIRNWLRGIRDSGYN
LIGLAATLGETFFRSIEGSSVTLALMENVQVMEFRHLRQLMHLAVVPLVKHCPAELWHMW
TVNLLQPIFVHCQQALDYSWSCLLREGRAKVPDNFGNLSGSELKVEVMEEKLLRDLTREV
CSVLWVLASPGLNSGLPTLEQLGPANRIDSFLKDLESFASSSLAGFVMLNVSTALPALRI
TIQVFSWTDSEAVTKVVPFCGALIHLAVATNRAELRQFVGKDLFSSIIQGLSIESNAIIS
AELVGLCREIYVYLSDKDPSPKQILLSLPDMKQEDLLAFDDSLSKTASPKEQKQHMRNLL
LIATGNKLRALASQKITNVITNVTTRNRSSAAHHGSRAEEDDHIGLAALS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaccttgccgcggcctccgcggtggcggcgatctccgctgtgatggactgg
cgttcctcgcccgacgcccgcaacgctgccttcacgtacctcgaatcggtaaagagtgga
gatgtacgagcgttggcgagcacatcttttctattggttcggaaggaccaggcatcagag
atcagactgcatgggttcaaaatgttgcagcacttggtgaggttgaggtgggaggaactc
agtgttgcagaacgaaatgaattcgctaatttgactgtcaatttgatgtcagaggttatt
ggtccccgtgaggagtgggctttgaagagtcaaacagccgcgttagtagcagaggtagtt
agaagggagggagttactttgctgaatacattacttccctctattgtttctctgtctaac
agtggtcctgccgaggctgagttagttgccatgattctaaggtggcttccagaggacatc
actgttcacaacgaggatttagaaggtgataagaggagagcactgttgcgtggccttacc
gaggcactgccacaaattcttccgcttttatattctttacttgagaaacattttgtggct
gcttcaagcgagcacacgaagcagcaaatggagttggctaaacagcatgtagggacagta
atagctgttctaaatgctgtcaatgcgtatgctgaatgggctcctgtgacagatctggcc
aaatatggtttaattcatggatgtgggtccttgctttcttacagtgattttcgcgttcat
gcttgtgagttcttcaaaataatctgtcaaagaaagcgacctgtggacgtcgcaatttct
gagtatgatgcagcaatgagcaacattttccaggtgttgatgagcgtttcccaagaattt
ttaaccaaatctaggatgcagcccagtgctattgatgatagtgaatatgagtttgcagtg
tgtatttgtgagacaatggttgcgctaggttcttctaacatgcagtgcatactggctgat
ggagcaaggacttctcacttcctacaacaaatgctggaatattaccaacatgacaggatt
gcactccatttccagtctttattattttggctggttgtattgagggaaccatcgaaagcg
aagtctgttgctcgtgtttctggcgatacaactagtggaagttcaactgaaaaggagaag
aaaggggtgttattatttattactgatgaaatatacagtactctactggacgtcgctttc
aaaagaatgctgaagaaaagtgcaagttcatctccaagtccgttagaactgtggaatgaa
gagcttgagggtaagagtgacttcagcaactatcgcaccaaactgctggatctcataaga
gttgttgcttctcaaagacctgttattgctgcagcgaatgctgttcaaagaataagtgtt
gtttttggagatactaatgaagcaacaaagtcccctgaggttcttgacgcaatggtaggt
gcacaacttgggcttgaaacagttgttagtgccatatttgatggctcaggtgattatacg
aagactgaccaggagatacaattccaaatacacagtacttttgaaggtttacttcagcag
cttctttctctgaagtggacagaacctagccttgcagttattcatggtcattatttggat
tctttgggtcttttcttgagacattatccagatgcagttgccagtgttgtgaataagctt
tttgaactattgacatctctccccatcacaattcaggacctgtcaaataattcccggcaa
gctaggttgcagatttgctcgtcattcattcgtatatcaagagctgctgataaagcactt
ctgcctcatatgaagaacattgccgacaccatggcttaccttcaaggagagggccgctta
ctacgtgccgaacatgatcatctatgtgaagcgtttcttattatggcctcctcttctggg
attcagcagcaacaggaagtcctggcctggttacttgagcctcttaataagacgtggacc
caaatggaatggcaaactgcgtatttgtctgatccatctggtttgacacacatgtttgct
gacagccaatttatgtggtccatttatcataatgttacattctttgagaaggcactcaag
agaagcgggaccaaaaaatcaacagcagctctgcaagcagcgccgaccaccacagcagta
actggttatctacatccaatgtcttcgcatctatcatggattctgccccctcttttaagg
ctgttgcgatgtatacatgcactttgggccgagccatttgctcagtcgctgactggagaa
accaaggcggcaaaaagcatgactattgcggagcaggccagccttttgggagagacaaat
aaactcacaaaaggccaagttgcaccttctgatggattactggatgttcaaagggaggga
gagtctaaagaaaataacataagaaactggttacgagggatccgtgacagtgggtacaat
cttataggtttagcagctactcttggggaaacatttttccgaagcatagagggttcatct
gtcacccttgctcttatggagaatgtgcaagttatggagtttcgtcatttgcgccaactc
atgcaccttgctgttgttcctttggttaaacattgccctgctgaactatggcatatgtgg
acagtgaaccttttgcagccaatatttgttcactgccagcaagcacttgattactcatgg
tcttgtcttcttcgtgaaggccgagctaaggttcctgacaactttggtaatctttctggg
tcagaactgaaggtagaggtgatggaagagaagttgctacgagatttgactcgtgaagta
tgttctgtgctttgggttttagcatcaccaggtttgaacagtgggcttccgaccttggaa
caacttggacctgccaaccggattgattcttttcttaaagatctggagtcctttgcttcc
agctctcttgctggatttgttatgcttaatgttagcactgcccttcctgcattgaggata
actattcaagtgttcagttggacagatagtgaagcagtgactaaagtagttcccttttgt
ggtgcattgattcaccttgctgtggcaacaaaccgggctgagcttaggcagtttgttgga
aaggacctattttcttctataatacagggcttatctattgaatcgaatgcaattattagt
gccgaacttgttggtctctgtcgagaaatatacgtctatctgtcagataaagatccatca
ccaaaacagattcttctgtccctccccgacatgaagcaggaagatttgctcgcttttgat
gattcgttgagcaaaactgctagtccaaaagagcagaagcaacatatgcgaaacttactt
ctgatagccacagggaacaaattaagggctcttgcttctcaaaagatcacaaatgttatt
accaatgttacaactcgaaatcggagcagtgccgcacaccatggatccagagctgaagaa
gatgatcacattggattagctgcattatcatag
DBGET
integrated database retrieval system
