Brachypodium distachyon (stiff brome): 100833417
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Entry
100833417 CDS
T01717
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100833417
Membrane trafficking [BR:
bdi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100833417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
100833417
NCBI-ProteinID:
XP_003575516
UniProt:
I1IHN1
LinkDB
All DBs
Position
4:4197376..4209466
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AA seq
1245 aa
AA seq
DB search
MANYLAQFQTIKSSCDRVVIAVEDVSDLWLNVRQSFEQRLPVKKACLNNKARNPVFVENL
PAEFIQTTDSRLRSRFPQEQYLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPGNDQATKMAKKVYARLETDFNTKRRERCCKFDLHGTDADFWDDFDSKM
VDCIRNTLDRRVQFYEEENRKLSEQRFTPIWNFCNFFILKESLAFMFEVTNLHEDSLREY
DELELCYSESVNLPGKHREFGGLDTGDDQAALLNPGFKALTQIIQDDVFREFEFRQYIFA
CQAKLLFKLSRPVEVAARGYAFVVGFSKTLALHENALPFCFREVWVITACLGLIKSTSAQ
YDNGIVAIDSEKEFHRLQGDLYSLCRVKFMRLAYLIGYGVEIEKSPVNSASLSMLSWPKP
ATWPSIPPDSSAEIMTKEKITLQAKPREKLFNIQRKPLPLEPSFLLREANRRRAFLSVGN
MSELYDSVDGSGLDAHSKLPSNKSSSNLMIRTMSGPATSETSLPVDRPMRLSEIHVAAEH
ALKQTISDPDFMTSLSSPEEFENRYMELTKGAADNYHRSWWKRHGVVLDGEIAAIFFKHG
NYDLAAKSYEKVCALYSAEGWEELLADVLPDLAECQKILNDEAGYLASCVKLLSLESSLF
SSKERQAFQSEVVRLAHSEMKHPVPLDVSSLITFAGNPAPPLELCDGDPGTLSVAVWSGF
PDDIALESLSLRLSASSSADEGLKAIKSSDARVLVPGRNIITFAIPPQKPGSYVLGALTG
QIGKLSFRSHGFSQDGPVDTDEFMSFEKPTRPVLKVRKPRALVDITPAVSSALLMNELQW
IGLIVKPIDYSLKGGILHIDAGAELKIEESQMIEIESYRSNGEQSGPTDASKALSSSSEP
GRVEKVPIENGKIKLPDWASDVTTLVWFPVRAIDDTIARGTSPASPLKHSIVDGMRMIAL
KLEFGAFHNQVFERTIAVHFTNPFHVSTRVVDKCNDGTLLLQVILHSEVKATLHVKDVSL
DLQAGFEHLGNGDGRPTSSLFPLVIAPSSRAGILFVIRLSGTKDLDELENSDSMMTIKYG
ISGDRTTGAHSPVPVKPDDSEELLFKISLKLKRPVLDPCLAVGFLPFSTDCLRVGQLVNM
KWRVERLKDLDEASLPDDEILYQVDANPQNWMVAGRKCGHISFSKAQGSRIEIAVTCVPL
VSGYVHPPQLGLPDVGEANVSCNPAGPHLVCVLPPTLSTSYCIPA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactacctggcgcagttccagaccatcaagtcctcctgcgaccgcgtcgtcatc
gccgttgaggatgtgagtgacttgtggctcaacgtcagacagagttttgagcagcgcttg
cctgtcaagaaggcatgcctcaataacaaggcgaggaaccctgtttttgtggaaaacttg
ccagctgagtttatacagactactgattcaaggctgcgtagtcgattcccacaagaacaa
tacttattctggttccgggaaccatatgccactgttgttcttgttacttgtgaggatctt
gatgagttcaagaccattcttaagccccgtctcaaattaattgtgcaaaatgatgagagg
gaatggttcatcgtatttgtgtcgaaggcccatcctggcaatgatcaagcaactaagatg
gcaaagaaagtatatgctaggcttgagaccgatttcaacactaaaagaagagaaagatgc
tgcaaatttgatcttcatggaactgatgcggatttctgggatgattttgattcaaaaatg
gtggactgcataagaaacacattggatagaagggttcagttttatgaagaggaaaaccgc
aagttaagtgagcagcgattcaccccaatatggaacttctgcaacttctttattctgaag
gaaagcttggcattcatgtttgaggtgactaatcttcatgaagattcactacgtgaatat
gatgagcttgaactatgctactcagaatcagtaaatctccctgggaaacatcgggaattc
ggaggactggatactggtgatgatcaagctgcactgttaaatccagggttcaaagctttg
acccaaattattcaggatgatgtattcagggaatttgagtttaggcaatatatatttgct
tgccaggctaagttattatttaaactgtctcgtccggttgaggttgctgcaagaggatat
gcttttgttgttggattttccaagacgctagccctgcatgaaaatgctctaccattttgt
ttccgtgaagtatgggtgataactgcatgtttgggtttaataaaatctacaagtgcacag
tatgacaatggaattgttgctattgactcagagaaggagttccatcgtcttcagggtgat
ctttattctctatgccgtgttaagtttatgaggcttgcttacttaattggttatggtgtt
gagatagaaaaaagcccagtcaacagcgcatctttaagcatgctatcttggccaaagcca
gctacttggccttcaattccacctgattcatcggcggaaatcatgacaaaagagaagata
actcttcaagcaaaaccaagagaaaagctcttcaacattcagaggaaaccactgccatta
gaaccttcttttcttcttcgtgaggctaataggcgtagagcttttctttctgttggaaat
atgtctgaattatacgattcagttgatggttcaggtttagatgcacattcaaaacttcct
tccaacaaatcttcttctaacttgatgataagaactatgtccggaccagcaacctcggag
acttccctaccagttgatcggcccatgaggttgtcagaaattcatgttgcagctgagcat
gcattgaaacagacaatatctgatcctgattttatgacatcactttcatcaccagaagaa
tttgagaatagatatatggagcttactaaaggtgcagctgacaattatcaccgctcttgg
tggaaaaggcatggagttgtgcttgatggagagattgcagctatattctttaagcatgga
aattatgatttggctgcaaaatcatatgagaaagtctgtgctctttattccgcagaaggc
tgggaagagctgttggcagatgttcttcctgatcttgcagaatgccagaagattcttaat
gatgaagctggttatctggcttcctgtgtaaagttactttctctagagagtagcttgttt
tcgtctaaagagcggcaagctttccagtcagaggttgtccggcttgcccacagcgaaatg
aagcatcctgtgccccttgatgtttcatcactaattacttttgctggaaatcctgctcca
ccactagaattatgtgatggagatcctggtacactatctgtagcagtttggagtggcttc
ccagatgacatcgcactcgagtctctcagtttaagattgtcagcttcctctagtgcggat
gaaggtcttaaggcaataaagagttcagatgcacgtgttcttgtaccaggtagaaatatt
atcaccttcgccattcctcctcaaaagcctggttcctatgtgttgggtgctctcactgga
cagattggcaagctgtcattcagatcgcatggattttctcaagatggtccagtggacact
gatgaattcatgagctttgagaagccaacaagacctgttttgaaggtgagaaaaccgagg
gctttggttgatattactcctgctgtatcctctgcattacttatgaatgaactccagtgg
atcgggttgattgtcaagcctatagactattctttgaaaggtggcatattgcatatagat
gccggtgctgaactgaaaatcgaggagtcccagatgattgagattgaaagttacagaagc
aacggggagcaatctggtcctactgatgcttcaaaggcattatcaagctccagtgaacct
ggaagggttgagaaggtgcccatcgaaaatgggaagataaaactgccagattgggctagt
gatgtaaccactcttgtttggtttcctgttcgtgctattgacgataccattgcaagggga
acatccccagcatctcctctgaaacatagcatagtagatgggatgagaatgattgctctc
aagcttgagtttggagccttccataatcaagtatttgaaaggaccattgccgtacatttc
actaatccattccatgtaagcacacgtgttgttgacaagtgcaatgatggaactctactt
ctgcaggtgatattgcattctgaagtgaaggccactctgcatgtaaaggacgtatcgtta
gacctacaagctggatttgagcacttaggcaacggagatggacggccgacctcaagtttg
ttccctctggttattgctccttcttccagagctggaatcttatttgtaatacgtttaagt
ggcacaaaagatctagatgagctggaaaattcagacagcatgatgaccatcaagtatggg
atatctggtgatagaacaaccggagcacactctccagttccggttaaacctgatgattct
gaagagcttctattcaagatttcactcaaactgaaacgccctgtcctggatccttgtctg
gcagttggattccttccattttctaccgattgcctgagagttggtcaattagtcaacatg
aaatggagggttgaaaggctgaaggacctggacgaagcatctcttcctgacgatgaaata
ctttatcaggtcgatgctaatccacaaaactggatggttgccgggaggaaatgcggtcac
atttcattctcgaaggcacaaggatcaaggattgagattgctgtgacatgcgtcccgctg
gtgtcagggtacgtccaccctccacagctaggccttccagacgtaggcgaggcgaatgtg
agctgcaatccggcaggtccccatctggtgtgcgtccttcctcccaccctcagcacctcc
tactgcataccagcttga
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