Brachypodium distachyon (stiff brome): 100833497
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Entry
100833497 CDS
T01717
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100833497
Enzymes [BR:
bdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
100833497
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100833497
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
100833497
NCBI-ProteinID:
XP_010236008
UniProt:
I1IEC2
LinkDB
All DBs
Position
3:complement(56094713..56100346)
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AA seq
773 aa
AA seq
DB search
MGMPRKVAQRGSAAPPAAKKGKKTPPKAAKRAAPKKQKLLESSSDDSEPEQQQQQQHQEE
EEEDNESDLISLSGSDDEEFSDSEGGGSLDEADPEDEFDDEEDVNDDPLAGDILAGSDDD
SDEEDDSGEESDESDDLVAKSVALDRQKEKAEEEADEELKLNIRSESDEFRLPTKEELEE
EALGPPNLPNLKRRISEIVRVLSNFSKLRQVDVPRKDYVDQFKSDVMAYYGYNEFLIEAF
VEMFPAVEVVELVESFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWSKVGLVV
YDSTISSGATVEYMAGHYMKQGASSFLPVIALAPQEKERIVDMAAAPGGKTTYIGALMKN
TGIIYANELNEKRLHGLLGNIHRMGVTNTIVCNYDGKELPKVLGMNSVDRVLLDAPCTGT
GTIWKDAQIKTSKDIDDIRNCAFVQKQLLIAAIDLVDANSKTGGYIVYSTCSMMIPENEA
VIDYALKKRDVKLVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLKK
MSNTIPVSSESAKGSEEAAENVDLSHDDVDEEVEDVSDRQPTQSKKRKDGKKKNEHASII
EVAGDQRQAPDRPAIQPKNRKGAKKSSSPKNAEMNGDVKESHNQQTEQVKSHKVGKKSSG
PKSAEIRNRSQKETDNEQQPEQVKSHKDLKRRNEPKSAAINGDKETNDEQADQKSHKKKP
QSDKLKKSGSKSTSGTKEKKPVTDEGKKRKRKWQFKLRRDWEAKQKSVKRTKV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgccgaggaaggtcgcgcagcgcgggtcggcggcgccacccgccgcgaagaag
gggaagaagaccccaccgaaggcggcgaagagggcggcgcctaagaagcagaagcttctc
gagtcctcctccgacgactccgagcccgagcagcagcagcagcagcagcaccaggaagag
gaggaggaggataatgaatcagaccttatttccctctctggctccgatgacgaggagttc
tcggattcggaaggcggcggcagcctcgacgaggcggatcctgaggacgaattcgacgat
gaagaggacgttaacgacgatcccctcgctggcgacatcctcgccggcagtgacgacgat
agtgacgaggaggatgactctggagaggaatcagatgagtctgatgacttagtggctaag
tcagtagctcttgatcggcagaaggagaaggctgaagaagaggcagatgaggagcttaaa
ctcaacataagatcagaatctgatgagttccgattgccaactaaggaggagctggaagaa
gaagcacttggaccgcccaatctgccaaatctcaaaaggaggatctcagaaattgtccgg
gtgctctcaaactttagcaagctcaggcaagtagatgttccacggaaagattatgtcgac
cagttcaagtccgacgtgatggcgtactatggatacaatgaatttctcattgaagcattt
gttgagatgttcccagctgttgaagttgttgagctagtagaatcctttgagaaaagacca
cctgagtgcttgcggacaaatacgctaaagacccgtaggagggatcttgctgctgctctt
attccaagagggtttaatctcgatccgatagggaaatggtcaaaggtgggattggttgtg
tatgactccactatttcttctggtgccactgttgaatatatggctggacattacatgaaa
caaggcgcgagttcctttttgccagtgattgctcttgctcctcaggagaaggagcgaatt
gttgatatggcagctgccccaggtggaaagaccacatacattggagctctgatgaaaaat
actggaataatctatgcaaatgaactcaatgagaaaaggttgcatggactgttgggcaac
atacatcgcatgggtgttacaaacaccatagtttgtaattatgacggtaaagagcttccc
aaagtacttggaatgaactcggttgacagagtactgttggatgcgccctgcactggcact
ggaaccatttggaaggatgctcaaataaaaacttctaaggacattgatgacatcaggaac
tgtgcgtttgtgcaaaagcaattgctgatagctgccattgatttggttgatgcaaactcc
aaaactggtggttacattgtttactcaacttgttcaatgatgattccagagaatgaggcg
gtcatagactatgcacttaaaaagagggatgtaaagcttgttccctgtggactggatttt
ggacgcccaggattcatccgtttccgggagcatcggtttcatacttctttagataagaca
aggaggttttacccccatgtcaacaatatggatggcttttttgtcgctaagctgaaaaag
atgagcaatacaattccagtgtcatcggagtcagctaaaggatctgaagaagcagctgag
aatgttgatcttagccatgatgatgtagatgaggaagttgaagatgtttctgatagacaa
cctactcagtcgaaaaaacgtaaagacggaaagaagaaaaatgaacatgcaagcataatt
gaagtggccggagaccagagacaggcacctgatagaccagcaattcagccaaagaaccgt
aagggcgcgaagaaaagtagtagccctaaaaatgctgaaatgaatggagatgtgaaagaa
tcacacaatcaacaaactgagcaggtcaagagccacaaggttgggaagaaaagtagcggc
cctaaaagtgctgaaataagaaatagaagtcagaaagaaacagacaatgaacaacaacct
gagcaggtcaagagccataaggatctgaagagaaggaatgaacctaaaagtgctgcaata
aatggagacaaggaaacaaatgacgaacaagcggatcagaagagtcacaaaaagaagcca
cagtctgataaacttaaaaaatctggttccaagagcacctcagggacaaaagaaaagaaa
ccagtgactgatgaaggaaagaagaggaaaaggaaatggcaattcaagctgaggcgggac
tgggaagcaaaacaaaagtctgtgaagaggacgaaggtatga
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