Brachypodium distachyon (stiff brome): 100833521
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Entry
100833521 CDS
T01717
Name
(RefSeq) chaperonin CPN60-1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100833521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100833521
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100833521
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100833521
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100833521
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100833521
Messenger RNA biogenesis [BR:
bdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100833521
Chaperones and folding catalysts [BR:
bdi03110
]
Heat shock proteins
HSP60 / Chaperonin
100833521
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100833521
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100833521
Exosomal proteins of other body fluids (saliva and urine)
100833521
Exosomal proteins of breast cancer cells
100833521
Exosomal proteins of colorectal cancer cells
100833521
Exosomal proteins of bladder cancer cells
100833521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100833521
NCBI-ProteinID:
XP_003558831
UniProt:
I1H9V2
LinkDB
All DBs
Position
1:72628410..72633977
Genome browser
AA seq
575 aa
AA seq
DB search
MYRAAASLASKARQAGSSARQVGSRLAWSRNYAAKDIRFGVEARALMLSGVEELADAVKV
TMGPKGRTVIIEQSFGAPKVTKDGVTVAKSIEFTDRVKNVGASLVKQVANATNDTAGDGT
TCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKGMARMINTPEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGKTLYNELDVVEGMKFERGYISPYFITNQK
SQKCELEDPLILIHEKKISSFPAMVKVLEYALKMKKPLLIVAEDLESEALGTLIINKLRI
NMKVCAVKAPGFGENRKSNLQDLAILTGGEVITEELGMNLENFEPHVLGTCKKVTVSKDD
TVVLDGAGDKKAIEERAEQLRSAIEESTSDYDKEKIQERLAKLSGGIAVLKIGGASEPEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASRDLDKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVIVGKLLEQDNTDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIIVETPTEEKSAPAMGGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgcggccgccagcctcgcctccaaggcccggcaagccgggagcagcgcccgc
caggttgggagcaggctagcctggagcaggaactatgctgccaaggacatcaggtttggc
gtcgaagcccgggccttgatgctgagtggtgtcgaagagttggctgacgcagttaaagtg
accatgggtcctaagggacgcactgtcattattgagcaaagctttggtgctccaaaagtt
acaaaggatggagtgaccgttgcaaagagcatcgaattcactgacagggtaaagaatgtt
ggtgcaagtcttgtgaagcaggttgctaatgcgactaatgatactgctggggatggtaca
acatgcgctactgttctgacaaaggctatattcactgagggttgcaagtctgtagcagct
ggaatgaatgcaatggatctgagacgaggtatctcgatggctgttgattctgtggtgaca
aacctgaagggtatggcgagaatgatcaacacgccggaggagatagcacaggtgggtact
atatcagctaatggggaaagggagattggtgagctcattgcaaaggctatggagaaggtt
ggtaaggagggagttatcaccattgcggatggtaaaactctttacaatgagcttgatgtt
gtggaaggcatgaagtttgagaggggttacatctctccgtacttcattaccaaccaaaag
agccagaagtgtgaactagaggatcccttaatcttgatacatgagaagaagatatccagt
tttcccgcgatggtcaaggtgttggaatatgctctcaagatgaaaaagcctctgcttatt
gttgcagaagatttagaaagtgaagcactgggtaccctgattattaacaagcttcgcata
aacatgaaggtctgtgcagtgaaagctcctggttttggagagaacaggaaatctaactta
caggaccttgctatccttacagggggtgaagtcataaccgaggaacttggaatgaacctt
gagaactttgagcctcatgtgctgggtacttgcaagaaggttacggtatctaaggatgac
acagttgtccttgatggagctggagataagaaagccattgaagagagagctgaacagctg
agatctgcaattgaggaaagcacttctgactatgataaggaaaagatacaggagcgattg
gcaaagctttctggtggtatcgctgttctgaagattggtggagcgagtgaacctgaagtt
ggtgaaaagaaggacagagtgactgatgccctaaatgctacaaaagctgcagtagaggag
ggcattgttccaggtggtggtgttgcccttctttatgcctcaagagatctcgataagttg
cagactgccaactttgaccaaaagattggtgtccagatcattcaaaatgctttgaagacc
ccagtacacaccattgcgtcaaatgctggtgtagaaggagctgtcattgttggcaagctc
ttggaacaggataatactgacctaggctatgatgctgccaaaggtgagtatgtggacatg
ataaaggctggtatcattgacccactcaaagtgatcagaacagccctggtggatgctgca
agtgtgtcgtctctgatgaccaccacagaagctatcattgttgagacccccacggaagag
aagtcggcacctgcaatgggtggtggcatgggcgggatgggtttctaa
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