Brachypodium distachyon (stiff brome): 100833663
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Entry
100833663 CDS
T01717
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase RNF144A-B
KO
K11971
E3 ubiquitin-protein ligase RNF14 [EC:
2.3.2.31
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100833663
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100833663
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100833663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR_1
IBR
zf-C3HC4
IBR_2
zf-RING_5
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
Phage_zn_bind_8
Motif
Other DBs
NCBI-GeneID:
100833663
NCBI-ProteinID:
XP_024311845
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Position
5:23161340..23163208
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AA seq
370 aa
AA seq
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MELGYAGSRCTGPGVVWPSVGAVVREGGGSGGKWNESGRGRTETLARGWRRDLLLGFVSC
SLDVGRGPSQRGVDFIELPCQHYFCQRCMETYSSMHVKEGTVLNLVCPDDKCRGVVPPNL
LKRLLGDADFERWERLVLQKTLXSMADVXYCPRCETACLDDGNNATCSECLFNFCSLCRD
PCHTGRGCIILTPEEKLLTLKERARVHCLSKGDIGRRINLANEIRSIKEVLRSSVPCPHC
GVAISRVSGCDHMFCRNCRNHFNYSYARKEVRAVDFIKEDEVLKPKVKLPLSVSIRQYPC
PICHQPHPKIGNNNHLFCEPCQVHYCALCRKVVRKSSEHYGPRGCKQHTVDPEIPQSRTK
KKDDSGSELP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagctggggtatgcggggagtaggtgcaccgggccgggcgttgtgtggccgagcgtc
ggggcggtggtgagggagggaggcggctcggggggtaagtggaacgagtcagggaggggg
cggacggagacactggcgcgggggtggaggagggacctgctgctagggttcgtgtcctgc
tccctggacgtgggccgtgggccgtcccaaaggggcgttgatttcatagaacttccatgc
cagcattacttttgccagaggtgcatggagacatactcaagcatgcatgtcaaagaagga
acagtactgaatttggtgtgccctgatgacaagtgcagaggcgttgttcctccaaattta
ttgaagaggttgcttggagatgcagattttgaaagatgggaaagattggtacttcagaag
actctanattcaatggctgatgtataatattgtccaagatgcgaaacagcttgcctggat
gatgggaacaatgccacatgctccgagtgcctcttcaacttttgcagcctctgcagagat
ccttgtcacacagggaggggatgcattattcttactccagaagaaaaacttctcacctta
aaggaacgtgcaagggtacactgcttgagcaaaggtgatataggcaggagaattaacttg
gcgaatgaaatacgcagcatcaaggaagtgctacgttcttccgttccatgtccgcactgt
ggtgtcgccatctcacgggtgtctgggtgcgaccacatgttttgcaggaactgtcgtaat
cacttcaactatagctatgctaggaaagaggtaagggcggttgattttattaaagaggac
gaggtactgaaaccaaaagtgaaactgccactatcagtcagcatcagacaatatccatgc
ccgatatgccaccaaccacatcccaagattggaaacaacaaccacctcttctgcgagcca
tgccaggttcattactgtgctctttgtcggaaggtggtgcggaagagctcggagcactat
ggccccagagggtgcaagcagcacactgtcgatcctgagatccctcagagtagaaccaag
aagaaggatgactctggatcagaacttccgtaa
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