Brachypodium distachyon (stiff brome): 100833719
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Entry
100833719 CDS
T01717
Name
(RefSeq) protein transport protein SEC23 isoform X1
KO
K14006
protein transport protein SEC23
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100833719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100833719
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100833719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
100833719
NCBI-ProteinID:
XP_003574621
UniProt:
I1I7T2
LinkDB
All DBs
Position
3
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AA seq
763 aa
AA seq
DB search
MSEFLELEAQDGIRMTWNVIPGTKQDAASCVVPVSALYTPLYPNPAIPVLPYAPLRCRIC
RSILNSFSVVDFDSKIWQCPFCFQRNHFPQHYSTVSASNLPTELYPQCTTVEYMATAEAG
PVSPPVFLFVVDTCMIEEEIGYLKSALAQAVELLPDQSLVGLITFGTYVQVHELGFGLLP
KSYVFNGTKEVTKDQILEQMGFFAGKKKPTTGVIAGARDGLSAESIARFLLPASECEFML
NSVIEELQKDPWPVSADQRASRCTGAALSVAAGLLGVCVPGSGARIMAFIGGPSTEGPGS
IISKPLSEPIRSHKDLDKGSVALYNKAVKFYEEIAKQLVHQGHVLDLFACALDQVGVAEM
KVAVERTGGIVVLAESFGHSVFKDSLRRIFQSGDNDLGLCFNGIFEINCSKDVKIQGIIG
PCTSLEKKSPISSDTVVGQGNTSAWKMCGLDRKTSLCLVFDIAKKDGPDAIGQSTGNQFY
FQFLTYYQHHDGQMRLRSTTVSRRWVAGSGSVQELLTGFDQEAAAAVMARLVSFKMEAEV
DFDPVRWLDRALISLCSKFGDYQKETPSSFSLSPRLSIFPQFIFNLRRSQFVQVFNNSPD
ETAYFRMMLNRENVANAVVMIQPSLISYSFQSGPEPVLLDVTAIAADRILLLDSYFTVVI
FHGITIAQWRKAGYQDQEGHEVFAQLLQAPQEEADTIIKERFPVPRLVVCDQYGSQARFL
LAKLNPSVTYDSATPPPPGGDVIFTDDVSFQVFMDHLQRLAVQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttcctggagctcgaggcccaggatgggataaggatgacttggaatgtgatc
cctggcacgaagcaggatgctgctagctgcgttgtccctgtttctgccctatatactcct
ctctacccaaaccccgcaattcctgttcttccatatgcccctctccgctgccggatttgc
cgttccatcctcaactccttctcggttgtcgactttgattccaaaatttggcaatgccca
ttctgctttcagcgcaaccactttccccagcactactctactgtttcggcaagcaaccta
cctaccgaactgtatcctcaatgtactactgttgagtacatggccactgccgaagcaggc
cccgtatcaccaccagtcttcctttttgttgttgatacttgcatgattgaggaggaaatt
ggttatttgaagtctgccctagcgcaagcggttgagctattgcctgaccaatcccttgtc
ggattaattacttttgggacatatgtacaggttcatgaattgggttttggcttgttgcct
aagtcatatgtgttcaatgggacaaaggaggttacaaaggatcaaattcttgagcaaatg
ggtttctttgcagggaagaaaaaaccaacaacaggtgtgatcgctggcgcaagggatgga
ctttcagcagaaagcattgctaggttcttgttgcctgcttctgagtgcgagtttatgttg
aattcagttatagaagagctgcaaaaggacccttggcccgtttctgctgatcagcgtgca
tcaagatgtaccggagctgcattaagtgtcgcagctggtctcttgggggtttgtgtgcct
ggatcaggtgctagaattatggcgtttataggtggtccatctacagagggacctggttct
ataatatctaagcccttatcagagccaattcgttcacacaaagaccttgataaaggttct
gttgcactttacaacaaagcggttaagttctatgaggagattgcgaagcaacttgtgcat
caaggccatgtgcttgatttatttgcctgtgcactcgaccaggttggtgttgctgagatg
aaggttgcagtggagagaaccgggggaatagtcgtgcttgcagaaagttttggccactct
gtttttaaagattcacttagacgcatttttcagtcgggcgataatgaccttggcttatgt
ttcaacggcatatttgagatcaactgctcaaaggatgtcaaaattcaaggcatcattgga
ccttgtacttccctggagaagaaaagtcctatatcctcagatacagttgtaggccagggg
aacactagcgcttggaagatgtgtggtctcgataggaaaacatcactctgtctagtattt
gatattgccaaaaaagatggccctgatgcaattggtcaatcaacaggcaatcagttctac
ttccaattcttaacctattatcagcatcatgatggccagatgagattgcgatctactaca
gtttccagaagatgggttgctggttctggcagtgttcaggagcttctaactggctttgat
caagaggcagctgctgcggtcatggcacgcttggtctcatttaagatggaagctgaggtt
gattttgacccagtaagatggcttgaccgagcattgattagtttatgttcaaaatttggt
gactatcagaaggagacaccttcatctttcagtttatccccgcgcctatcaatttttccg
cagttcatatttaatttgagacgttctcagtttgttcaggttttcaataatagtccagat
gaaactgcatatttcaggatgatgttaaacagagagaacgtagctaatgcagttgtgatg
atccagccttcacttatatcatattcctttcaatcaggtccagagcctgttctattggat
gtaactgcaattgctgctgacagaatccttttgttagattcttattttactgttgtcata
ttccacgggataactatcgcgcagtggcgaaaggcgggttaccaagatcaagaagggcat
gaggtatttgcacagttgttgcaagctccacaggaggaagctgatacgataattaaggag
cgctttcctgtgccacgtttggttgtgtgtgatcaatatggttctcaggctcgattctta
ctggcaaagcttaatccatctgtgacatatgactccgccactccgccaccacctggaggg
gatgtcatattcacagatgacgtgagctttcaggtcttcatggatcatctccagcggctg
gcagttcagtag
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