Brachypodium distachyon (stiff brome): 100833895
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Entry
100833895 CDS
T01717
Name
(RefSeq) ATP-dependent helicase BRM
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100833895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100833895
03036 Chromosome and associated proteins [BR:
bdi03036
]
100833895
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100833895
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100833895
Chromatin remodeling factors
BAF complex
100833895
PBAF complex
100833895
GBAF(ncBAF) complex
100833895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_14
Bromodomain
Motif
Other DBs
NCBI-GeneID:
100833895
NCBI-ProteinID:
XP_003570802
UniProt:
A0A0Q3PTS7
LinkDB
All DBs
Position
3:complement(832258..843844)
Genome browser
AA seq
2206 aa
AA seq
DB search
MQPGGPPSGSSRSSPATSPRTEQQQPPTPSQQQQAQAQRLYGGFLPPTAMTHHHEQQQQQ
QQQSYQPGAQHGMMGGGGGGSGGFPQSSGPMPPFQGQRNLPHPGGPQGMVAGQQHNQNTI
QQQQAYMQFLIQQQKSHGMHLQQQAKMNMAGPSSRDQDVAANPAKMQELMSLQAQAQAQM
LKRPSEHLQQAEKQTEQGQPGSSEQRGGDMRPPMPPQGVPGQQMSSASMVRPMQPMQGQA
GTGSIGGNPLTMGHYQLIHAWAKEQNIDLSNPANANLISQILPMLQSRMAAMQKQNEASM
AAQQQQNQQMPPRQVNSDAPVNGNISGQAPLKPRQSLPPSSSVSVGVETKMMNPSNLQMQ
QQISAHNREISNERAVRPPMPVGNVGQMMHMAQSSGHVNKISEQPNPKNALVSSEAMQMQ
YARQLQQTNRATTPTATPVETGGSQAPPQGARPHSGFTKHQLHVLKAQILAFRRLKRGDR
TLPSEVLELIMSPPPPPSDSQAQLVSVPSVTLNRERSAPVSADEHGKAMESSDKAPEKPP
MLKGPSLPKVEVSASEDRTSSASGPMQVMKASPKEPLRIGPVSVPEQSNTSLVKSEQEQE
RGIQRTPGRSDHSNERGKSLPSESGPADAEQAKRAASTSSAPSPRDVPRKYHGPLFDFPS
FTRKHDSLGGANYNGSLALGYDVKDLLAQEGMIVLGKKREDNLKKISGLLSINLERKRIR
PDLVLRLQIEEKKLKLLERQARMRDEVEEVQQEIMAMPDRIYRKFVKQCERQRVELIRQV
QQMQKASREKQLKSIFQWRKKLLEAHWAIRDARITRNRGVAKYHERMLREFSKKKDDDRS
KRMEALKNNDVERYRQILLEQQTSVPGDAAQRYNVLSSFLSQTEEYLYKLGGKITAAKNQ
QQVEEAENNAAAAARAQGLSEEEVKAAAQCAGQEVMIRNTFSEMNAPRENTSDNKYYTLA
HAVSEKVTKQPSLLRLGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAY
LMEFKGNYGPHLIIVPNAVLVNWKSELLNWLPSASCIFYVGAKDQRQKLFSQEVLAVKFN
VLVTTYEFVMFDRSKLSRIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQ
NDLKELWSLLNLLLPEVFDNRKAFQDWFSKPFQRDAPTHSEEDDWLETEKKVIIIHRLHQ
ILEPFMLRRRVEDVEGSLPRKESIVLRCKMSAIQGTIYDWIKSTGTIRVDPEDEKIRIQR
NPMYQAKTYKNLQNKCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKLHR
SGHRVLLFSTMTKLLDILEDYLQWRQLAYRRIDGTTSLEDRESAIVDFNRPGSECFIFLL
SIRAAGRGLNLQSADTVVIYDPDPNPQNEEQAVARAHRIGQTREVKVIYMEAVVDNISSY
QKEDELRNGGSGDLEDDLVGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHE
ERRMTLETLLHDEERYQETLHDVPSLQEVNRMIARTEDEVELFDQMDEEFDWTGDMMKHN
QVPKWLRVSSTELDSVVASLTKKPMRNASGVSVPDTTEKLEKRRGRPTGSGKYSIYREFD
DDEDDEESDEDSEERNTPSLPEEDEAGDYEDEDENDDNKDQSEEEEPINDDGYDFQHGVG
RGKAHKSEEAGSTGSSSGSRRLPPPAPSSLKKLKSLSALDARPGTFSKRTTDDLEEGEIA
LSGDSHMDLQQSGSWNHERDDGEDEQVLQPKIKRKRSIRIRPKPNAEKQEDRSGVDVTFS
QRGARLAFPGDGDYDSQLKSEQEVHAFVDPTSRQQDTIHPIVKQKRNMPSRKASPASRVG
KSTHLSGSGEASAEQSKENWSKKKVIDSAGPDSGGTKMSDSMQRKCKNVISKLWRRIDKE
GHKMIPNIASWWRRNENSSSKGVAGNNLDLQKIELRVDGFEYGGVTEFIADMQQMLKSVV
QHFNYRIEVRVEAETLSTLFFNIMKIAFPDSDFTEAKSTMSFSNPGGGASSIAAPSAKHS
ASGNKRRSTTSEAEQHGSGSGKHNQRPSVGEAPSRAKSERDSRHSGPGSRDQLLDSAGLL
PHPSDLFIVKKKRQERARTSIGSPSSSGRVGPLSPTNTGRMGPVPSPRGARTPFQRDPHP
SQQSLPGWGAHSDRGGSSSPGIGDIQWAKPAKRQRTDSGKRRPSHM
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccggcgggcccccctccggcagctcgcggagctctccggcgacgtcgcctcgg
accgagcagcagcagccgcccacgccgtcgcagcagcagcaggcgcaggcgcagcgcctt
tatggcggcttcctgcccccaacggcaatgacgcatcaccatgaacaacaacagcagcag
caacagcaatcgtaccagcccggtgcgcagcatggtatgatgggaggtggcggcggcggc
agcggcggcttccctcagtcgtcaggcccaatgccgccgttccagggtcagaggaacctg
ccccaccctggtggacctcagggcatggttgctggtcagcagcacaaccagaacacaatt
cagcagcaacaggcatacatgcagtttctgatccaacagcagaaatcccatgggatgcac
ctgcagcaacaggccaaaatgaatatggcaggaccatcttctagggaccaggatgttgct
gccaaccctgcgaagatgcaggagcttatgtccctccaggcccaggcccaggcccagatg
ttgaagagaccgtctgagcatcttcaacaggcggagaagcagacagagcaggggcagccg
ggcagtagtgagcaaaggggcggtgatatgaggcctcctatgccaccacaaggagtccct
gggcagcagatgtcatcagcgagcatggttaggccgatgcagccaatgcaaggccaagcg
ggcactggcagcattggtggtaaccctttaacaatgggccactatcagcttatccatgcc
tgggcaaaggagcagaacattgacctttctaatcctgcaaatgcaaatctcatttctcaa
atcttacccatgttgcagtccaggatggccgccatgcagaagcagaacgaggcaagcatg
gctgcacagcagcagcagaatcaacaaatgccgcctaggcaggtgaacagcgatgcccca
gtgaatgggaatatttctggtcaagctccattgaagccacggcagtctctcccccctagt
tcttcggtttctgttggagtagagactaagatgatgaatccgagcaacttgcagatgcag
caacagatatctgcccacaacagggaaatctcaaacgagagggcggtgaggccacccatg
ccagtgggtaatgttgggcaaatgatgcatatggcccaaagttctggacatgtgaataag
atttctgagcagcccaatccaaagaatgctctggtgagctcagaagcgatgcagatgcag
tatgcaagacagctgcagcagactaaccgagctaccacccctacagcaactcctgttgaa
acaggaggatcacaggccccacctcaaggtgctcggccacattcgggtttcacaaaacat
caacttcatgtacttaaagctcagatattagcttttcggcgtctcaagcgtggtgatcgt
acactcccatcagaagttcttgaattgatcatgtctcctccgccaccgccatctgactca
caggcgcagctggtctctgtaccttcagtaacactgaatcgtgaaaggtctgctccagtc
agtgctgatgaacatggaaaggccatggaaagtagtgataaagctcctgaaaaacctcca
atgttgaaaggccccagtttacccaaggtggaggtttctgcttcagaagacagaactagt
tctgctagtggtcccatgcaagtgatgaaagcttcgcccaaggagcctcttagaattgga
ccagtttcagtacctgaacaaagtaacaccagtctggttaaatctgagcaggaacaagaa
aggggtatccagagaacacctgggagaagtgatcacagtaatgaaagggggaaatcttta
ccgtctgaaagtggtccagcagacgctgagcaggcaaaaagagctgcctctacaagcagc
gcaccatctcccagggatgttcccagaaaatatcatggaccactatttgatttcccgtcc
ttcactagaaaacatgattcattgggcggtgcaaattacaatggtagtctcgcacttggt
tatgatgtgaaagatttgttggcccaggaaggcatgattgttcttggcaagaaacgagag
gataacttgaaaaagatcagtggcttgctttcaattaatctagagaggaaaaggatccga
ccagatcttgtattgagattacagattgaagaaaaaaagctgaaactccttgagcgtcag
gctcgtatgagggatgaagttgaagaggtgcaacaagaaataatggcaatgcctgatagg
atatacagaaagtttgtcaagcaatgtgaacgtcaacgtgttgagctgataaggcaagtt
cagcagatgcaaaaggcctcaagagagaagcagctgaaatccattttccagtggcgcaag
aagcttttggaagcacattgggctattcgtgatgcacgaataacacgtaaccggggggta
gccaagtaccatgaaaggatgttgagggaattctcaaagaaaaaggatgatgatcgaagt
aaaagaatggaggcactaaaaaacaatgacgtggaaagatatcgtcaaatactgttggaa
caacaaactagtgttcctggtgatgcagctcaaagatacaatgttctatcttcattctta
tcccagactgaagagtacctttataaacttggaggaaaaattactgctgccaagaatcag
caacaagtagaagaggcagaaaataatgctgcagcagctgcacgtgcacagggtctttct
gaagaagaagtgaaggctgctgcacaatgtgcgggtcaggaggttatgataaggaacacc
ttctctgagatgaatgcaccaagggaaaacacttctgataacaagtactatactttggct
catgctgtgagtgagaaagttacaaagcagccgtcacttttgcgattaggcactttaagg
gactaccagctggtgggccttcagtggatgctttcattgtacaataataagttgaatggc
atcttggctgatgagatgggtcttggcaagactgtacaggttatggctttgattgcatac
ttgatggaatttaaagggaattatggaccacatctcataatagtgccaaatgctgtcttg
gtcaattggaagagtgaactgctaaactggttaccatctgcatcttgcatcttctatgtt
ggtgcaaaggatcaaaggcaaaagctgttttctcaagaggttttggctgtgaaatttaat
gttcttgtaacaacatatgaatttgttatgtttgatcgttccaagctttcaagaattgat
tggaagtatattataattgacgaggcccaacgaatgaaggacagagagtctgtcttggcc
cgtgatcttgatcgctatcgttgccagcggcgtctccttctcactggcactcctctacag
aatgatctcaaggagctttggtcccttctgaatttgttgctacctgaagtgtttgacaat
cgcaaagcatttcaagattggttctcaaagccttttcagagggatgctcctacacatagc
gaagaagatgattggttggagaccgagaagaaagtgattattattcacaggctgcatcaa
atcttggaaccttttatgctgcgtagacgagtcgaggatgtcgaaggctcactcccacgg
aaggaatctattgttttgagatgcaaaatgtctgcgattcaaggcactatatacgattgg
atcaaatccactggcaccattagggtggatcctgaagatgagaaaatacgtattcagagg
aatccaatgtaccaggccaagacatataagaatctccaaaacaaatgcatggagctgagg
aaagtttgtaaccaccctttgctgtcatatccttttatgaattactacgggaaagatttt
attatcagatcttgtgggaagttgtggaatcttgatagaattctaattaagcttcatagg
tctggtcaccgtgtactcctctttagcacgatgactaaacttcttgacatcctggaggac
tatttgcaatggaggcaacttgcttacagacgaattgatggaacaactagcttggaagac
cgtgaatcagcaattgttgacttcaataggcctggttccgagtgtttcatattcttgctt
agcattcgtgctgccggcagaggcctgaatcttcagagcgcagacactgttgtaatttat
gaccctgatccgaatccacaaaatgaagaacaagcagttgccagggcccatcgtataggg
cagactagggaggtaaaggttatttatatggaggctgttgttgataacatctcaagttat
cagaaagaggatgaattgaggaatggtggcagtggagatttggaggacgatcttgttgga
aaggacagatacatgggttcaattgaaagtctcatccgcaacaatatccagcagtacaaa
atcgatatggcagatgaagtcattaatgctggccgttttgatcaaagaacgacccatgag
gaaaggcgcatgactttggagaccctactgcatgacgaagagaggtatcaagaaactctt
catgatgttccttcactacaggaagttaatcgtatgattgctcggactgaagatgaagtc
gagctctttgatcagatggatgaagaattcgattggacaggagatatgatgaaacataac
caggttccaaagtggctccgagttagctctacagagcttgattctgttgtggcgagttta
actaaaaagcctatgagaaatgcgtctggtgtcagtgttcctgacaccactgaaaaactt
gagaaaagaagggggaggccaacggggtctggtaagtactccatctacagggagtttgat
gatgatgaagatgatgaggagtctgacgaagactctgaagagaggaatacaccatctctc
cctgaagaagatgaagcaggagattatgaagatgaagatgaaaatgatgataacaaggat
caatcagaggaagaggaacctataaatgatgatgggtatgattttcaacatggcgtgggg
agaggaaaagctcacaaatctgaagaagctggttctacaggatcttcatctggaagcagg
agattaccaccacctgccccttcttctttgaaaaagttgaagtctctatctgcattagat
gcccgcccaggcactttttcaaaaagaactacagatgacctagaggaaggcgagattgca
ttatcaggggactcgcatatggatctacagcaatcaggcagctggaaccatgaacgggat
gatggggaagatgaacaggtgctgcaaccaaaaataaaacgaaaaaggagtatccgtatt
cgtccaaaaccaaatgcagaaaaacaggaagatagatctggtgtcgatgttaccttctcc
caacggggtgctcggcttgcattcccaggagatggtgattatgattcacagttaaagtct
gagcaagaggtccatgcttttgtggatcctacctccaggcagcaagacacaattcatcca
atagtgaagcagaagcgtaacatgccatctagaaaggcctctcctgcttctagggtgggg
aaatccactcacttgtctgggtctggcgaggcatctgccgaacagtccaaggaaaattgg
agcaagaagaaggtcatcgattctgctggtccggattctggtggcacgaagatgtctgac
agcatgcaaagaaagtgcaagaatgtaataagcaagctttggaggaggattgacaaagag
ggccacaaaatgataccaaatatagcttcttggtggcgaaggaatgaaaattcctcgtcc
aaaggtgtggctggcaacaaccttgacttgcagaaaattgaactgcgagttgatggattt
gagtatggcggtgtaaccgagttcatagcggacatgcaacagatgttgaaaagcgtggtt
caacatttcaactacagaattgaggtccgagtagaagccgagactctcagtaccttattt
ttcaatataatgaagattgccttcccagattctgacttcacggaggctaagagtactatg
tcattttcaaatcccggaggaggtgcaagtagcattgccgctccatcagcaaagcactca
gcttcaggcaataagcgccgttctaccaccagtgaagcagagcagcatggttctggtagt
ggcaagcataaccagcgtccatccgttggcgaggctcctagccgggccaagtctgagcgg
gactcgaggcattctggaccaggcagcagggaccagctccttgatagcgcagggctgttg
ccgcaccctagtgatctattcatagtcaagaagaagagacaagaacgggcgagaaccagc
atcgggtctccatccagttcaggtcgagttggaccgctctccccaaccaacacagggcgg
atgggcccagtgccctcacccagaggtgccaggacgccgttccaaagggaccctcaccca
tctcagcaatccttgcctggatggggcgcccattcggatcgtggtggaagctcatctcct
ggcatcggagacatccagtgggccaagccggcaaagagacagaggaccgacagtggcaaa
aggcggccaagccatatgtga
DBGET
integrated database retrieval system