Brachypodium distachyon (stiff brome): 100834210
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Entry
100834210 CDS
T01717
Name
(RefSeq) nuclear ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bdi03016
]
100834210
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
100834210
Transfer RNA biogenesis [BR:
bdi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
100834210
Prokaryotic type
100834210
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
100834210
NCBI-ProteinID:
XP_003571652
UniProt:
I1HYQ6
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All DBs
Position
3:6238439..6240738
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AA seq
306 aa
AA seq
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MAKSRKSAEAATSTAPPPPPPSSAAKPKAKTRLEIEGYPVEGISIGGQETCVIFPTLSLA
FDIGRCPQRAVSQDFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLRELVERLF
DVHRAMDQSELKHTLVPLEVGEEYELRRDLKVKAFKTYHVIPSQGYVIYSVKQKLKQEFL
GLPGSEIKRLKLSDVEITNTVTVPEIAFTGDTMSDFILDPDNADVLKAKILVVESTFLDD
SVSVEHAREYGHTHLFEIASQSDKLQNRAILLIHFSARYTTEEIDAAISRLPPSFRSRVY
ALKEGI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagccgcaagtcggccgaggcggcgacttccacggcccctcctcctccaccc
ccttcttccgccgcgaaacctaaggcgaagacgcggcttgaaatcgaggggtaccccgtg
gagggcatctccatcggcgggcaagagacctgcgtcatcttcccgacgctgagcctcgcc
ttcgacatcggccggtgcccgcagcgcgcggtgtcgcaggacttcctcttcatctcccac
gcccacctcgaccacatcgggggcctccccatgtacgtggccacgcgggggctctacagg
ctgcgcccgcccaccatcttcgtccccaagtacctcagggaactcgtcgagcggctgttc
gacgtgcaccgcgccatggaccagtccgagctcaagcacaccctcgtcccgctcgaggtt
ggtgaggagtatgagctcaggagggatctcaaggtcaaggccttcaaaacctaccatgtc
atacccagccaggggtatgtgatatactcagtgaagcaaaagctcaagcaggagtttctt
ggcctcccagggagcgaaatcaagaggttgaagttatcagatgtggagattactaataca
gtgacggtacctgagattgcttttacgggagatacaatgtcagatttcattcttgatcct
gataatgcggatgtgttaaaggcaaaaattcttgtggtagagagtacctttcttgatgat
tctgtttcagttgagcatgcaagagaatatgggcacacacacttgtttgagattgcaagt
cagtctgataaacttcaaaacagagccattctactgattcacttttcagctcgttataca
acagaggaaattgatgcagcaataagtagattgccaccgtcttttcgaagcagagtttat
gcactgaaggaaggcatctaa
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