Brachypodium distachyon (stiff brome): 100834237
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Entry
100834237 CDS
T01717
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03420
Nucleotide excision repair
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100834237
09124 Replication and repair
03420 Nucleotide excision repair
100834237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100834237
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100834237
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100834237
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
100834237
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100834237
TCR (transcription coupled repair) factors
Cul4-CSA complex
100834237
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100834237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
100834237
NCBI-ProteinID:
XP_003558082
UniProt:
I1GMH9
LinkDB
All DBs
Position
1:complement(4286668..4295217)
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AA seq
830 aa
AA seq
DB search
MSHPHATAPKRPFSSASPSPTSPAPPHMKKAKLPASSSSSAGPTEKNGLHLDPTAAAAVR
GSGRTNGEEDAEMLLADQDELRAPSASVPGGVTANLFRKKATLPQPSATSATRKPLRIKI
GQPKLPKNFEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYERVKKE
CEIHIAAKISALVGQSPDLVVFLSLVHRTWQDFCDQMLIIRGIALLLDVKYVKNIANLCS
VWDMGLQLFRKHVSLSPEIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSE
TFEKPFLECTSQFYATEGVKYLQQSDIPDYLKHVESRLQEEHERCIMYLEANTRKPLIAT
TEKQLLHRHTSAIIEKGFTMLMEANRVKDLWRMYTLFQRVDAIEMLKQALSLYIRGTGQG
IIMDEEKDKDLVPFLLEFKASLDKILEESFAKNESFSNTIKESFEHLINLRQNRPAELIA
KFLDEKLRAGNKGTSEEELEGILDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLGKSASID
AEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINDSFKQSSQARTKLPTGIEMSVHVLT
TGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKEL
SVSLFQSVVLMLFNDAQKLSFLDIKDSTGIEDKELRRTLQSLACGKVRVLQKTPKGRDVD
DKDEFVFNDEFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKT
LSHTLLITELFQQLKFPIKPADMKKRIESLIDREYLERDRSNPQIYNYLA
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccccacgccaccgcccccaagcggcccttttcctccgcctctccctctccc
acctcccccgcgccgccgcacatgaagaaggccaagcttcccgcctcctcctcctcctcc
gccggccccaccgagaagaacgggctccacctcgacccgacggccgccgccgccgtccgg
ggcagtggccgcactaacggcgaggaggacgcggagatgctgctcgctgaccaggacgag
ctccgcgctcccagcgcatcggtgcccgggggcgtcacggccaacctattccgcaagaag
gccacgctgccgcagccatctgccacctctgccacacgcaagcccctccgcatcaaaata
ggccagccaaaattgcctaaaaactttgaggaggatacttgggctattttgaaggatgct
attacagctatatttctcaagcagaagctttcatgtgacgttgagaaactttatcaggca
gctggtgatctttgtctacacaagctaggggcaaatctatacgagcgtgtcaagaaagaa
tgtgaaatacatatagcggcaaaaatatcagctttagtgggtcaaagtccagatttggtt
gtatttttgtcgttggtgcatagaacatggcaagatttttgcgaccagatgttgattatt
cgtggtattgctttacttcttgatgtaaaatatgtcaagaatattgcaaatctttgttct
gtgtgggatatggggctccagctgttccgcaagcatgtgtcactgtctccagagattgaa
cacaaaaccgttactggtcttttaagattgattgagagcgagaggcttggtgaagcaata
gataagacattgcttagtcatcttctgaagatgtttactgatcttggaatgtattctgag
acttttgaaaagccttttcttgaatgcacttctcagttttatgctactgaaggtgtcaaa
tatttgcaacaatctgatattccagactacctgaaacacgtggagtcaagattgcaagaa
gaacatgagaggtgcattatgtatttggaagctaacacgaggaagccacttatcgcaact
acagaaaaacaattgctacatagacatacatctgcaattattgagaagggatttacaatg
cttatggaagcaaatcgtgtaaaggacctctggaggatgtacacccttttccagagggtt
gatgccattgagatgctaaagcaagctcttagtttatatatccggggcactggccagggc
attatcatggacgaagagaaagacaaagatttggttccctttcttctggaatttaaggca
tctcttgataaaatattggaagaaagttttgccaaaaatgagtctttctcgaatactata
aaggagtcattcgagcatcttatcaatctacgccagaaccgacctgctgaattgattgca
aagtttcttgatgagaaactccgagctggaaataaaggtacctcagaagaagaactggag
ggaatacttgataaagttttggttctgttccgatatatacaaggaaaagatgtatttgag
gcattctacaagaaggatctggctaagaggttgctgctggggaaaagcgcatcaatagat
gctgaaaagtcaatgattacaaagctcaaaactgaatgtggaagtcaatttaccaacaaa
ctggagggaatgttcaaggacattgaattatccaaagaaataaatgattctttcaagcaa
tcatctcaggcaaggacaaagcttcccactggaattgaaatgagcgtccatgtgcttaca
acaggctactggccgacatatccaccaatggatgtaaaactcccacatgaacttaatgtt
tatcaggatatatttaaggagttctatttgagtaagtacagtggaaggcgtctgatgtgg
caaaattctttgggtcactgtgtcttgaaagtagagttccctaaaggtagaaaggagctt
tcagtgtcattgtttcagagtgtagttttgatgttattcaatgatgcgcaaaagctaagc
ttcctcgacataaaagattcaactggtatcgaggataaagaattgagaagaacactgcag
tcacttgcgtgtggtaaagttcgggttctccaaaagacaccaaaagggcgagatgtagat
gataaggacgaatttgtatttaatgacgaatttagtgcccctctttatcgcataaaggtg
aatgcgattcagatgaaggagacagtagaagaaaacacgagcaccactgagagagtattc
caagatcgtcagtatcaggttgatgcggccatagttcgaattatgaagacgaggaaaacc
ctcagccacactcttctaataaccgagctctttcagcagctcaaattcccgatcaagcca
gcggatatgaagaaaagaatagagagcctaatcgatagggagtacttggagagagaccgg
agtaacccccagatatacaattacctggcttga
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