Brachypodium distachyon (stiff brome): 100834239
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Entry
100834239 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100834239
04121 Ubiquitin system [BR:
bdi04121
]
100834239
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100834239
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100834239
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100834239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_1
zf-RING_16
HypA
DUF7129
DUF1272
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
100834239
NCBI-ProteinID:
XP_003558247
UniProt:
I1H708
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All DBs
Position
1:complement(65797039..65798460)
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AA seq
278 aa
AA seq
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MASSPMSYWCYHCSRFVRVSPATVVCPDCDGGFLEQFPQPPRGGGGSGRRGAMNPVIVLR
GGSLSGFELYYEDGSGDGLRPLPGDVSHLLMGSGFHRLLDQFSRLEAAAPRPPASKAAVE
SMPSVTVAGGGGAHCAVCQEAFEPGAAAREMPCKHVYHQDCILPWLSLRNSCPICRSELP
AAAVPEAEADAGLTIWRLPRGGFAVGRFAGGPREQLPVVYTELDGGFSNGVGPRRVTWPE
REGQVDSGEGRIRRVFRNLFGCFGRGSRPESSSQSRSG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtctccgatgtcgtactggtgctaccactgcagccgcttcgtgagggtctcc
ccagccaccgtcgtctgcccggactgcgacggcggctttctcgagcagttcccgcagccg
ccgcgcggaggcggcggcagcggccggcgtggggcgatgaacccggtgatcgtgctccgc
ggtggatcgctgtccgggttcgagctctactacgaagacggctcgggcgacgggctgcgg
ccgctgcccggcgacgtgtcgcacctcctgatggggtcggggttccatcgcctgctggac
cagttctcgaggctggaggcggcggcgccgcggccgccggcgtccaaggctgcggtggag
tcgatgccgtccgttacggtcgccggaggaggcggggcccactgtgcggtgtgccaggag
gcgttcgagcctggcgccgcggcccgggagatgccgtgcaagcacgtctaccaccaggac
tgcatcctcccctggctctccctccgcaactcctgccccatctgccggagcgagctacca
gcggcggccgtccctgaggcagaggcagatgcaggactcaccatctggcgactcccccgc
ggcggatttgccgtcgggaggtttgccggcggtcccagagaacagctaccagttgtctac
accgaactggatggtggcttcagtaacggggtcgggccgaggcgggtgacatggccagag
agggaggggcaagtagacagtggcgaaggtcggattcgccgtgtatttaggaatctgttt
ggttgttttggtcggggcagccggccagagagttcctcgcagtcccgcagtggctga
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