Brachypodium distachyon (stiff brome): 100834501
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Entry
100834501 CDS
T01717
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00900
Terpenoid backbone biosynthesis
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Module
bdi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100834501
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bdi01006
]
100834501
Enzymes [BR:
bdi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100834501
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100834501
2.5.1.29 geranylgeranyl diphosphate synthase
100834501
Prenyltransferases [BR:
bdi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100834501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
100834501
NCBI-ProteinID:
XP_003570062
UniProt:
I1ICG2
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All DBs
Position
3:52103463..52104828
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AA seq
346 aa
AA seq
DB search
MALSSLFAPLPLPLPKLPYTSKSSRFVPIRTSAAAAAATASPSFDLRRYWTSLIAEVEGE
LDAAMPIRPPESIHSAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPTAAAL
EMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISRTPSPN
PVSHAVLLRVLAELARTVGSTGMAAGQFLDLAGATALGEREVMQVLTKKFGEMAECSAAC
GAMLAGAGPDEEASLRRYGRTIGVLYELVDDIRSASGNGKMRSNASVLRSLGMDRALGIV
EELKAQAKAEADRFADKYGERVLPLYSFVDYAVERGFELQDAAAKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcttctctcttcgcccctcttccccttccgctgccgaagttgccctacacc
tccaaatcaagccgcttcgtccccatccggacctccgccgcggcggccgccgccaccgcc
tccccttcttttgacctgcgccgctactggacctcgctgatcgcggaggtcgagggtgag
ctcgacgcggcgatgcccatccgcccgccggagagcatccactccgccatgcgccacgcc
gtcctcccgggcgccggcaaggagggcgccgccaagcgcgcgcccccggtgctctgcgtc
gccgcctgcgagctcctgggcgcgccccgcgccgcggcgctccctaccgccgccgccctc
gagatgctccacgcggcgtcgctcgtgcacgacgacttgccgtgctttgacgctgcgccc
acccgccgcggccgcccgtccacccacgccgcctacggcaccgacatggccgtcctcgcg
ggcgacgcgctcttccccctcgcctacacccacgtcatctcccgcaccccttcccccaac
cccgtgtcgcatgccgtcctcctccgcgtcctcgcggagctcgcgcgcaccgtgggatcc
accggcatggccgccggccagttcctcgaccttgccggtgccactgccctcggcgagcgc
gaggtcatgcaggtgctgaccaaaaagttcggcgagatggccgagtgctccgccgcctgc
ggcgctatgctcgccggcgcgggccccgacgaggaggcctcgttgcggcgatacggccgc
accatcggcgtcctctacgagctagtggatgacatacggagcgcgtcgggaaacggcaag
atgaggagcaacgccagcgtcctgcgctcgctgggcatggaccgtgcgctcggcatcgtg
gaggagctcaaggcgcaggccaaggcggaggcggacaggttcgccgataagtacggcgag
agggtgttgcctttgtacagcttcgtggactacgctgtggagagggggtttgagctgcag
gatgctgctgcaaagccgtga
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