Brachypodium distachyon (stiff brome): 100834504
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Entry
100834504 CDS
T01717
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100834504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100834504
03051 Proteasome [BR:
bdi03051
]
100834504
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100834504
Proteasome [BR:
bdi03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
100834504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DZR_2
Motif
Other DBs
NCBI-GeneID:
100834504
NCBI-ProteinID:
XP_003570804
UniProt:
I1HWB3
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All DBs
Position
3:884709..887923
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AA seq
598 aa
AA seq
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MEAWPPLAPSAGDGSDAAPLPGPPPPPAVAGGGGVPMGAWGAAATARRETVAKETSAEAV
SRIVASCADSGGVAVAVVDANAVISGGAALATTASRLVTVPEVLEEVRDAAARRRLTLLP
TPVETVAPAPEFVKKVVKFARETGDLQTLSDVDMKIIALAYMLEAEIHGTSHLREHPPPL
HVVSVRKLQEAQLPGWGSNVPNLAEWEALDQMSEAGGDLNSRILPLKDLENQEIPTSDTN
SISETQGDAEPQPLVKDACIPWEDDENNEGWLPAVSRTTHRKYLRRKARRDALKVSEQSF
DTSSVAPSINDDKDLAEDCLEQVDSPSVAPEEIKSNVDGLESKEENEPKIAGTFHSDQLS
NGENGVANVDPVKEIDATDACTEQLDSLDIKSETEESVEASFVDDESSEQSWALRSLSES
TVACVTSDYAMQNVILQIGLRLLAPGGMQIRQLHRWVLRCHACYKVTQEIGKIFCPKCGN
GGTLRKVSVTVGQNGITMASRRPRVTLRGTKFSIPMPQGGREAVTKNPILREDQLPQKVL
HPKSKKSSKLGDDFLGVEDIFSHSGEKKASLKPPVRKALAMFSGKRNPNDNHFSRKKN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaagcctggccgcctctcgctccctccgccggtgacggctccgatgccgctcccctg
cccggtcctcctcctcctcccgccgttgccgggggcggaggggtccctatgggggcttgg
ggcgcggccgctacggcgcggcgggagacggtggcgaaggagacgtccgcggaggccgtg
agccggatcgtggcgagctgcgccgactcgggcggcgtggcggtggccgtcgtggacgcc
aacgccgtcatctcgggcggcgccgcgctcgcgaccaccgcgagccgcctggtgaccgtg
ccggaggtgctcgaggaggtgcgggacgcggccgcgcgccggcggctcacgctcctgccc
acccctgtcgagaccgtcgcgcccgcccccgagttcgtcaagaaagttgtcaaatttgct
agggaaacaggagacctccaaacactttcagatgtcgatatgaagattattgctctagct
tacatgttggaagctgagatccacgggactagccatttgcgggagcacccacctccactg
catgtggtcagtgtcagaaaattgcaagaggctcagttgccaggttggggctctaatgtg
cctaacctagcagagtgggaagcattagatcagatgtctgaagcaggtggagatcttaat
tctcggatacttccactgaaggatcttgagaaccaagaaatccctacaagtgacaccaac
agtatttctgagacccagggggatgcagaacctcagcctttagttaaagatgcatgtatt
ccttgggaagatgatgagaataatgaaggttggttgcctgctgttagccgcaccacgcac
agaaaatatttacggaggaaagcaaggcgtgatgctctcaaagtatctgaacaaagtttt
gatacaagttctgttgctccatcgattaatgacgataaagatttagctgaagattgtttg
gaacaagtggatagcccttctgttgctccagaggagattaagtcaaatgtggatggtttg
gaatccaaagaagagaatgaacctaaaattgctggaactttccattctgatcagctatct
aatggggagaatggtgtagcaaatgttgatcctgtgaaggagatcgatgctactgatgca
tgcactgaacaattggacagcttagatataaagagtgagactgaggaaagtgttgaagca
tcttttgtggatgatgaaagcagtgagcagagttgggccctgaggtccttatctgaatct
actgtagcatgtgttactagtgactatgccatgcaaaatgttatcctgcagattggtctc
cgtctgttggcaccaggaggcatgcaaatacgtcagttgcatagatgggttctgaggtgt
catgcttgctacaaggtgacccaagagattggaaaaatattttgcccaaagtgtggcaat
ggtggcaccttgcggaaggtttcagtaactgttggccaaaatgggattactatggcttca
cgacgcccacgtgttacactccgaggcacaaaattttcgatcccaatgccccaaggtgga
agagaggctgtcactaaaaatccaattttacgcgaagaccaacttccccagaaggttctg
caccctaaatcgaagaagtctagcaagctgggggatgacttcttgggcgtggaggacata
ttttcgcacagtggcgagaagaaagcgtccctgaaacctcctgtgaggaaggcacttgca
atgttcagcgggaagcggaatccgaacgacaaccacttttctcgcaagaagaactaa
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