KEGG   Brachypodium distachyon (stiff brome): 100834629
Entry
100834629         CDS       T01717                                 
Name
(RefSeq) THO complex subunit 7B
  KO
K13176  THO complex subunit 7
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03013  Nucleocytoplasmic transport
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100834629
  09122 Translation
   03013 Nucleocytoplasmic transport
    100834629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100834629
   03041 Spliceosome [BR:bdi03041]
    100834629
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100834629
Spliceosome [BR:bdi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100834629
SSDB
Motif
Pfam: THOC7 APG6_N YwqH-like DUF2730 SH3BP4_C FAZ1_C
Other DBs
NCBI-GeneID: 100834629
NCBI-ProteinID: XP_003573456
UniProt: I1I1D6
LinkDB
Position
3:14574507..14577041
AA seq 242 aa
MLTKGRKVAGRAQDISAHYAFGPHEDDAIIKHRLLTRITTTRGEPPLKKLQKKFISFTTE
IEKDADNSSDCEKLYKAFLQEINTFELPLLKSKAVVDANIREKESFDGLQVEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKLICLQPPRSETEKLIADLEKEIANLGAETAA
CTRTLELRKKQFALLLHVVEELQMSIEDEQRSIADELRVANEEPKMSIEEGSGGASDAMA
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcttaccaaagggaggaaagttgctggaagggcccaagacatctctgcacattatgca
tttggcccacacgaggatgatgcgattattaagcaccgccttctgactaggatcacaact
actaggggtgaaccacccctaaagaagcttcagaagaagttcatatccttcaccactgag
atcgagaaagatgcagacaattcgagcgactgtgagaagctgtacaaggcctttctacag
gagattaacacctttgagctgcctcttctgaaaagcaaggctgtggttgatgcaaatatt
agggagaaggagagctttgatgggcttcaggtggagatacagcgacagatcttgcaagct
cagactgatattgaggatctcaaaaagcaacttgaacaaagcaagattgagaggcagcat
aaagaggagtgtgaagcgatcaggaaactgatttgcttgcagcctccacggtcagaaact
gagaaacttattgctgatcttgagaaggagattgctaatttgggggctgaaacagcagca
tgtacaaggactttggagcttaggaagaagcagtttgctcttcttctgcatgtggttgag
gaactgcaaatgtcgatagaagatgagcaaaggagcatagcagatgagctgagagtggcc
aacgaagagcctaagatgagcatagaggaaggcagcggcggtgcttcagatgctatggct
gtagactga

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