Brachypodium distachyon (stiff brome): 100834629
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Entry
100834629 CDS
T01717
Name
(RefSeq) THO complex subunit 7B
KO
K13176
THO complex subunit 7
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100834629
09122 Translation
03013 Nucleocytoplasmic transport
100834629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100834629
03041 Spliceosome [BR:
bdi03041
]
100834629
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100834629
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100834629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
APG6_N
YwqH-like
DUF2730
SH3BP4_C
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
100834629
NCBI-ProteinID:
XP_003573456
UniProt:
I1I1D6
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All DBs
Position
3:14574507..14577041
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AA seq
242 aa
AA seq
DB search
MLTKGRKVAGRAQDISAHYAFGPHEDDAIIKHRLLTRITTTRGEPPLKKLQKKFISFTTE
IEKDADNSSDCEKLYKAFLQEINTFELPLLKSKAVVDANIREKESFDGLQVEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKLICLQPPRSETEKLIADLEKEIANLGAETAA
CTRTLELRKKQFALLLHVVEELQMSIEDEQRSIADELRVANEEPKMSIEEGSGGASDAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaaagggaggaaagttgctggaagggcccaagacatctctgcacattatgca
tttggcccacacgaggatgatgcgattattaagcaccgccttctgactaggatcacaact
actaggggtgaaccacccctaaagaagcttcagaagaagttcatatccttcaccactgag
atcgagaaagatgcagacaattcgagcgactgtgagaagctgtacaaggcctttctacag
gagattaacacctttgagctgcctcttctgaaaagcaaggctgtggttgatgcaaatatt
agggagaaggagagctttgatgggcttcaggtggagatacagcgacagatcttgcaagct
cagactgatattgaggatctcaaaaagcaacttgaacaaagcaagattgagaggcagcat
aaagaggagtgtgaagcgatcaggaaactgatttgcttgcagcctccacggtcagaaact
gagaaacttattgctgatcttgagaaggagattgctaatttgggggctgaaacagcagca
tgtacaaggactttggagcttaggaagaagcagtttgctcttcttctgcatgtggttgag
gaactgcaaatgtcgatagaagatgagcaaaggagcatagcagatgagctgagagtggcc
aacgaagagcctaagatgagcatagaggaaggcagcggcggtgcttcagatgctatggct
gtagactga
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