KEGG   Brachypodium distachyon (stiff brome): 100834641
Entry
100834641         CDS       T01717                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100834641
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100834641
   03041 Spliceosome [BR:bdi03041]
    100834641
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100834641
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100834641
Spliceosome [BR:bdi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100834641
SSDB
Motif
Pfam: RRM_1 RRM_7 CSTF2_hinge
Other DBs
NCBI-GeneID: 100834641
NCBI-ProteinID: XP_014757941
UniProt: A0A0Q3ENN3
LinkDB
Position
4:complement(14555320..14556612)
AA seq 430 aa
MGKKRSKKPREKDRHTPKSHPSSTPTRKRKRRKPRDPAPGSDSGSDCSPPSSPSPTARRL
LDPYPKPRLAALLASAASADPALLARIRAAADASLSHRRVFVHGLPPRADGPALEAAFSA
FGPLADCHVVAAGRCKGYGFLTFKSHAAARRAVRAPCVCVAGFPVSAQFASAGPDRSGAS
AVGRRVYVANVGPDASVERLRTFFAGFGELEGGPFGLDVDGEAETGRPRSQRYSLFVYRE
AEGARKAVEQPYRVFEGRTLRCQLAADVGLTAWKKKNEDTNNEPPVPAPPSYAALRPVLD
AVVAATGAGDLAMCARNPAQAAALLGQNPVLAAAALSSVLASAGIVPTPATATATATAGT
QSPAAVAGLSPVSSLEVAPLPVKPCAGPSGGAGLLGPYKPPSSSPVLLREEMGNAGRSHL
MKFSDDNAKL
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggggaagaagagatccaagaagccccgcgagaaggaccgccacacgccaaaatcccac
ccctcctccactcccacccgcaagcgcaagcgccggaaaccccgtgacccagcccccggc
tcggactccggctccgactgctcgcccccatcctcgccgtcccccaccgcgcgccgcctt
ctggatccctaccccaagccccgcctcgccgcgctcctcgcgtccgccgcctccgccgac
cccgcgctgctggcccgcatccgcgccgccgccgacgcgtccctctcccaccgcagggtc
ttcgtccacggccttcccccgcgcgccgacgggcccgccctcgaagccgccttctccgcg
ttcgggcccctcgccgactgccacgtcgtcgcggctggccgctgcaagggctacggcttc
ctcacgttcaaatcccacgccgccgctcgccgcgccgtccgcgccccgtgcgtatgtgtc
gctggattcccagtctccgcgcagttcgcctctgccggcccggaccgttccggcgcctcc
gccgttgggaggagggtgtacgtggccaacgtcgggccggacgcgagcgtggagaggctg
cgcacgttcttcgcggggttcggggagctcgagggcgggccgttcgggctcgacgtggac
ggcgaggccgagacggggaggccgcgctcccaacggtactcgctgttcgtgtaccgtgag
gcggagggcgcccggaaggcggtggagcagccgtaccgcgtcttcgagggccgcaccctg
cgctgccagctcgccgccgacgtcggcctcacggcgtggaagaagaagaacgaggacacg
aacaatgagccgcctgtgccggcgccaccgtcttatgcggcgcttcgcccggttctcgac
gccgtcgtggccgcaaccggcgcaggggacctcgcgatgtgcgcgcggaaccccgcccag
gccgcggcgttgctggggcagaacccggttctcgccgccgctgcgctgagctctgtattg
gcgtctgctggaatcgtgccgactccggcaacggcaacggcaacggcaacggctggaacg
cagagcccggcagctgttgctggcctcagtcctgtatcttccctcgaggtggcgccactg
ccggtaaagccttgtgctggaccaagtggtggtgcagggctgcttgggccgtacaagccg
ccatcttcttcacctgtcctcctccgggaggaaatgggcaatgctgggcgtagtcacctg
atgaagttctcggatgataacgcgaaattgtag

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