Brachypodium distachyon (stiff brome): 100834674
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Entry
100834674 CDS
T01717
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100834674
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
100834674
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
100834674
NCBI-ProteinID:
XP_010228118
UniProt:
I1H1X1
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Position
1:50445602..50461348
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AA seq
1904 aa
AA seq
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MWTNIFKIGELQTVSWFQFLPVEQDSSAISERSSKAEQKDALNRVVLSAYLHLQSEGFLS
TWTNSFVGPWDPSQGEHNPDEKIKLWLFLPGRQLSAPEMSHPAVVKLRVVSNGLWVAPGN
SEEVASALCQALRNSLERALRGLSYARFGDVFTKYNPPTRNQNSFRRARPTVEFVFAATE
EAIFVHVIISARYMRNLCSDDIEKVLTHSPRSVGEGLPVIVAPSGMLGRLVGCCPSDLAR
QVYSSKLSAPNLPGFTQPTICQLRGQSYYVEVALGVPAASTAKLSERENNQVKKELGSVE
EPHLGADGQQKIESADSLPVIERTFIYPPEAIMVPMVHQAFVRSSSKRMWSQGWMGSSSW
EAWPFWNFSPSSYFRNSSYLGSSRGLGVNSNFLRLRRQKNSNCNGMANSISSVSSTSNGS
MHAVAAKGGDLLADADSTACHQSDMPNDVSGSKMVSKRSHSEITEVSSHAGKEVRENMQG
TNGQGGCSWGWGEKGVVMDINLLLSEFGDFSDFFQEDELDFGEPPGTAESHTLVPSASDY
GDVTFIDSPSTAMDIPEQRLSPVGFTSLEAFNHQTMSPIQDVASKVQEPQKDIASPAGSQ
ALVLSSGRFDYLTRAEATLTFAPEYAAVEIPVGDMPATLFTNPYLPGSKKRGSCGFSSRV
YSYDGTQSSQTELAGDKLEKPVKLSPANLSRDVGLSNLYTLVQGGKKESDNRLNNTDEQS
CKGQTSRPVSGETSFSSSLPLQKKSDSMLNVGHFLLSMKTALATEIECITFQSAMCRIRH
TLLSLRTKASAEFKSSSSSFLQTDVSGKLDLVPKYDVKRKENIPARLSSDVDHEMYDRST
LENVGVWRPVGAPKGAKPLESLPAKTFTGANSSLSVQRQPIVDLLSAMALLVQQSTSFVD
IALDMDDGDGSFFLLSLDEQKRRGFSCDPSMVHAGCGGLLGTCHSKDCAGVDLLDPLSAE
VSESSMIGLLQSDIKTALKAAFANMDGPLSVIDWCRGRSNAADSAAMGDAYSFQYSTGDI
RETSSSIPIGGDAMSPPSDRGTSELEHHKGYHRVRPTIAVLPSPSLLVGYQDDWLKTSAN
CLKLWEKAPLEPFASPKPVTYYALCPDIDMLTSAATDFFQQLGTIYEVCKLGTHSPQHGG
GQMEHSPGKYLPSGLVLVECPDQVKTRSSHSISVSSVAEYFQALSKNWSVNSFVTSLARI
IKDIKLTSSISTNQKESSNIPCTVVYVVCPFPEPSAVLHTLVESSVALGSVVLLPERERK
SFLYAQVAKALNCSASVDEASASNVVMLSGFSIPKLVLQIVTVETLLRLHKPNELAIFKD
IAFTVYNKARRIPRVVSTSDMFQSPTYMSRPQSTIMHTASPGPTLWKECLVPRMSGQSLS
RETEFDASMRSVSWDNSWQPGRAVLPDPSKIPDLCAQDDRKYAFEPLFILAEPGSVDYND
MTESSRPGVDASSSRVYSSISGGTDSGASPLLEGSENDSAISLHCCYGWTEDWRWLVCIW
TDSRGELLDSLIFPFGGISSRQDTKVLQSLFIQILQQGCQIMSSSPEASNTRSRDVIITR
IGGFLELEIQEWQKAIYAFGGNEVKKWPVQLRRSIPDGIPSNSNGPTIQQQDMGLIQDRN
MPSSPSPLYSPHSKSSFTKGQSGNKKQILVEQTGMDSSRGSLHLVRSISLVAVSQDHSLH
LACQADILARPTPGEGNQSSSGVSSYLEGFAPVKSIGSMSASYLLVPSPSMRYLSPATLQ
LPTCLTSESPPLAHLLHSKGTATPLAMGYVVSKAVPPVRKNSAQLAKEDRHSVLSVSIVD
YYGGSTSTAIQEKMNRGGGGGNTSKQARNITHETSARDYEVDMHNVLEAVAAELHSLSWM
TASPVYAERRSALPFHCDMVLRLRRLLHYADRHLSQPAEKGEVA
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atgtggactaacattttcaaaattggggagcttcagactgtatcatggtttcagtttctt
cctgttgaacaagattcaagtgctatttctgagagaagttcaaaagccgagcagaaagat
gctctaaatcgcgttgtgctgtcagcatatcttcacttacagagtgaaggtttcctaagt
acttggacgaattcctttgttggtccgtgggatccatctcaaggagaacataaccctgat
gagaagatcaagctctggttgtttcttcctggccgtcagttgtcagcacctgaaatgagc
caccctgctgtagtcaaattaagagttgtttcaaatggtttatgggtggccccaggtaac
tcagaagaggttgcatccgcactatgtcaggccttaagaaattctttggagagagcacta
agggggctttcctatgcaagatttggtgatgtatttacaaaatacaacccccctacgaga
aatcaaaacagctttaggcgagcacgacctacagtagaatttgtctttgctgccaccgag
gaagcaatctttgtgcatgttataatatctgcaagatatatgcggaacctttgtagtgat
gatatagagaaagttctcacgcattccccccgttctgtcggtgaaggtcttccagttatt
gttgctcctagcgggatgctgggtaggcttgttggctgttgcccaagtgatcttgcgaga
caagtatattcaagcaaattgtcagcacctaatttaccaggttttactcagcccaccatt
tgccagctgagaggtcaaagttactatgttgaagttgcccttggggttccagctgcctca
actgccaaactatctgaacgagaaaacaatcaggtaaaaaaagagttaggttcagtggaa
gaacctcatctgggtgctgatggacagcaaaagatagaatctgctgatagccttcctgtt
attgaaaggacatttatttacccacccgaggctattatggtacctatggtccatcaggca
ttcgttcgctcttctagtaaaagaatgtggtctcagggctggatgggaagttcatcatgg
gaggcatggccattttggaacttttctccatcttcttactttcggaacagctcttacctt
ggatcttcacgtggacttggtgtgaactctaattttctaagactaagaagacaaaagaat
agcaactgcaacggaatggctaatagtatcagtagtgtcagtagcacttccaatggaagt
atgcatgcagttgccgctaaaggcggtgatcttttagctgatgctgactctacagcatgc
catcagtctgatatgccaaacgatgtgtctggtagcaagatggtatccaagcggtctcat
tctgaaatcacagaagtttcttctcatgccggcaaagaagtcagggaaaacatgcaaggc
acaaacggtcagggtggatgttcttggggctggggtgaaaagggggttgtgatggacatc
aatttacttctctcggagtttggagattttagcgacttttttcaagaggatgagttagat
tttggtgagcctccaggtaccgctgaatcacatactttagtaccgtctgcttcggactat
ggagatgtgacattcatagatagtccatccacagctatggatatacctgaacaaagactg
tctccagttggtttcacatctttggaggcattcaaccaccaaacaatgtcacctattcag
gatgttgcttcaaaagttcaggagcctcagaaagatattgcatcacctgcagggtcccaa
gccctagtgttatcatctggtagatttgattatctcaccagagctgaagctacactcact
tttgcaccagagtatgcagctgttgaaattcctgttggtgatatgccagcaacactgttt
acaaatccctacttgcctggatccaaaaaacgagggagttgtggttttagctcaagagtt
tattcatatgatggtacgcaaagttctcaaactgagcttgcaggagacaaacttgagaag
cctgttaaactatcgccagctaatctttctcgtgatgttggtctatcaaacttatataca
cttgtccaaggcgggaagaaagagagtgataacagattaaacaatacagacgaacagtca
tgcaagggacaaacatcaagacctgtttctggtgagacttcatttagttcttctctgcct
ttgcaaaagaagagtgacagcatgcttaatgttggccatttcctgctgtctatgaagacg
gcccttgcaactgaaattgaatgcatcacctttcagtctgccatgtgcagaataaggcat
acgctactgtctttgagaaccaaagcatctgctgagttcaaaagttcctcatccagtttt
ttgcagacagacgtcagcggcaagttagatctcgttccaaaatatgacgtgaaaaggaaa
gaaaatataccagctaggctatctagtgatgttgaccatgaaatgtatgatagatccacg
ctagaaaatgtgggagtttggaggcctgttggggcacctaaaggggcaaaaccccttgag
tctctgcctgctaaaacgtttactggcgcaaattcaagtctgtctgtacaaagacagccc
attgtggatcttctcagtgccatggctctgctagtacaacaatccacttcatttgttgat
attgcacttgatatggatgatggagatggttcttttttcttgctttccttggatgagcag
aagagacgcggattctcttgtgatccttctatggttcatgctggctgtggtggacttctc
ggaacatgtcattcgaaggattgtgctggtgttgatttacttgatccgctgtctgcagag
gtttcagagtcatccatgattggcctgttgcagtcggatataaaaacagctcttaaagct
gcctttgcaaacatggatggcccgttatcagtgattgattggtgcaggggtcgaagtaat
gcagctgattctgctgctatgggagatgcatactctttccagtactccactggtgatatt
cgagagacttcaagttctatacccattggtggagatgcaatgagcccacccagtgaccga
ggcacttcagagctggagcatcataaggggtatcaccgagttagaccaaccatcgctgtc
ctcccttcaccatctcttcttgttggttaccaggatgattggttaaagacctctgctaat
tgccttaaattgtgggagaaggctccattggaacctttcgcttcacccaagcctgttact
tactatgcactgtgccctgatattgatatgcttacttctgctgccactgattttttccag
cagcttggaacaatttatgaagtttgcaaactgggtactcattcaccacaacacggtgga
ggacaaatggaacattcccctggaaaatatcttccttcaggacttgttctcgttgaatgt
cctgatcaagtgaagactcgtagcagccactcaatttctgtcagttcagtagctgaatat
tttcaggctctatcaaaaaattggagtgtgaacagctttgtaacatctctggcaagaata
attaaggatataaagcttacttcaagcatctcaacaaatcagaaagagagcagtaacata
ccttgcactgtagtttatgtggtctgcccatttcctgaaccatctgcagtcctacataca
ctggtagaaagttctgttgctcttggatctgttgtcttattgccagagagagagagaaaa
tcattcctatatgcccaggttgccaaagccctaaactgcagtgcttctgttgatgaagca
tcagcttccaatgttgtaatgctctctgggttcagtataccgaagcttgtattgcagatt
gttactgttgaaactttactgagactccataaaccaaatgagcttgctattttcaaggac
atcgcgtttactgtgtataataaggcccgacgaattccacgggttgtttccacaagtgac
atgtttcagtcacctacgtatatgagtaggcctcagtccacaattatgcacactgcatct
cccggtcctaccctttggaaagaatgtttagttcctcggatgtctggacaatctctctct
agagaaacggagtttgatgcttctatgaggtcagtttcatgggataattcatggcaaccc
ggtcgtgctgtattgccggacccaagcaaaatcccagatttatgtgctcaggatgacagg
aagtatgcctttgagccacttttcattctagcagaacctgggtctgttgattataatgat
atgacggaatcttcaagacctggagttgatgcaagtagcagcagggtttacagctcaatt
tcaggtggtactgatagtggagcaagccctctacttgaagggtctgagaatgacagtgct
ataagtcttcattgctgttatggttggaccgaggactggcgatggttagtatgcatctgg
acagattctagaggagagttattagacagcttaatatttccttttggtgggatcagtagt
cgccaagacacgaaagttctccaaagtcttttcattcaaattctgcagcagggttgtcaa
ataatgtcatcttcacctgaggctagcaatacaagatcaagagatgtaataataacccgt
attggaggttttcttgaacttgaaattcaggaatggcagaaggcaatatatgctttcggt
ggtaatgaagtcaagaagtggcctgtgcagctacggcgatctatacctgatggcattcca
tcaaattctaatggtcctacaatccagcaacaagatatgggcttaatccaggacagaaac
atgccttcctcaccgagtcctttgtacagccctcattcaaaatctagcttcacaaaaggg
cagtccggcaacaaaaagcagatcctggtggaacaaactggaatggacagttcaagaggt
tcattgcacttggttcgtagcatcagtttagttgcagtttctcaagatcattcattgcat
cttgcatgccaagcggatatattagccagacctactcccggtgaagggaatcaaagcagc
agtggggtttctagttacttggaaggattcgctccagtcaagtccatcgggtcaatgtct
gcatcgtatctcctggttccttcaccaagcatgcgatacctttctcctgcgacattacag
cttccaacatgtcttacatcagaatccccgccacttgcccacctattgcacagcaaaggg
acagcaactcccttggcaatgggctacgtcgtctccaaagctgtcccaccggtaagaaag
aattctgcacagcttgcgaaggaggaccggcattctgttctctctgttagcatcgttgat
tactacggtggcagcaccagcaccgctattcaagagaagatgaacagaggcggtggtggt
ggtaacacaagcaaacaggcgaggaacataactcatgaaacatcagcgcgcgattacgag
gtggacatgcataacgtgctggaagccgtggccgctgagctccactccctttcatggatg
acagcaagcccggtctacgcggaaaggcgcagtgccctgcccttccactgtgacatggtc
ctgaggctgaggagacttctccactatgccgaccgacatctctctcaaccagcagagaag
ggagaggtagcttag
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