Brachypodium distachyon (stiff brome): 100834726
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Entry
100834726 CDS
T01717
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100834726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100834726
Enzymes [BR:
bdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100834726
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
100834726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF3134
Motif
Other DBs
NCBI-GeneID:
100834726
NCBI-ProteinID:
XP_003574126
UniProt:
A0A0Q3LYG3
LinkDB
All DBs
Position
3:31710888..31727024
Genome browser
AA seq
1181 aa
AA seq
DB search
MVTAAGKSSAATAAGKDGEYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSS
DTLRISLEKGHLLPPLRDVRMAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFN
FGHLPIMLMSKLCHLRGADSRKLIYHGEEATEMGGYFINGGMERLIRILVLQKRNYPMGM
VRGAFEKRGPGYTDKAVVIRCVQQDQTSVTVKLYYLQNGSARLGFWLGAREVLLPVGIVL
KALIDTSDREIFASLTCCYSDKYERGKGVVSNQLIGERAQIILDEVRALSLLTRTQCLEH
IGQYFRSAMEGFEKDDYQTVAEAVLKDYVLVHLQNNHAKFNLLIFMLQKLYALVDQTASP
DNPDALQYQEALLPGYLITVFLKDRIQDWLRKSKRLIIEEATKNKSFEFDNSQEIRKFLC
KHSTSVGRAIESLIKIGRANSQSMLDLPQREGMSIQAERLNFHRYISHFRSVHRGSAFAK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSACRISSFYHSEGAMKDFEKIKDRL
LAELVRGGMIPLSPKMEHTGPPEVLHVHLDGCIVGSIGSAKIEELVNYIRRLKLLAHPAT
PEDLEVGYVPLSIGGAYPGLYFFTSPARFVRPVKNLVSLPDGEPHIELIGAFEQAFMEIR
CPDGGDGGRKESFPATHEEIHPTAMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFCGQ
ALKFRTDVKAFHLQTPQSPIVRTATYKKYHMDEFPSGTNAIVAVLSYTGYDMEDAMILNK
SAVDRGMFRGDIYQTECIDLSTTRRGSVAEIFAKSSLSRDSSSVIDSDGLPRVGETIVPN
EQYYSTYNTLTGAIRPTRLKGTEPAAIDYVAVNGTNSKGSLQKVNIRLRRKRNPIIGDKF
SSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRMTIAMLLESIAAKAGSLHG
NFVDATPFASSVKEGDGNPWKPKSIVDEMGPMLASYGFNYHGVEVLYSGLFGTELTCEIF
IGPVYYQRLRHMVSDKFQVRTTGRIDQVTRQPIGGRKHGGGIRFGEMERDALLAHGASYL
LHDRLHSCSDYHIADVCSLCGSLLTATVIKSETQMKSKRNMLGVQTVKPPKNLACQACQT
NKGMETVAMPYVFRYLAAELAAMNVKLDLRLSNRTESHPQQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggtgacagcagctgggaagtcctccgccgcgacggcggcgggtaaggatggcgagtac
gcgacgctgcgggagctgtaccggccgcacatcgagtcgtttgactacttccttgacgag
gggctcgacaagatgctcctctccatccgccccatggacatctcccacccctcctcctcc
gacaccctcagaatatccttagagaagggtcatctgcttccaccactgagggatgttcgg
atggcaaaaccactctacccgcaggagtgcaggcaagctagaatttcgtatagcggtgaa
ttcaaagtggacaccctcttccaatttaataatggggcaccaatgaggcaaaccttcaat
tttggtcatttgcctattatgttgatgtcgaaactttgccatctaagaggtgctgattca
cgcaaattgatttaccatggggaagaggccactgaaatgggcgggtactttataaatggt
gggatggagagacttatcaggattcttgttttacaaaagcgtaactatcctatgggcatg
gtccggggtgcttttgagaaacgcggtcctggatacactgacaaagcagtggtcataaga
tgtgtccaacaggaccagactagtgtgacagtgaagttgtattacctccaaaatggaagt
gcaaggctagggttttggttgggagccagagaagttctccttccggttgggatcgttctc
aaggcccttattgatacaagtgaccgggaaatatttgcaagcttgacatgctgctacagt
gataaatatgaaagaggaaaaggagttgtcagcaatcagctaattggtgaaagggcacaa
ataattctcgacgaagtcagagctctgtccctcctcacacgcacgcaatgcttggagcat
atcgggcagtacttccgttctgcaatggaaggatttgaaaaagatgattatcaaactgtt
gctgaggcggttctcaaggactatgttcttgtgcacctgcaaaataaccatgcaaaattt
aatctattaatatttatgctgcagaaactttatgcccttgtagatcaaactgcttcacct
gataatcctgatgcacttcaataccaagaagctctcttgcctgggtacctgatcacagtt
tttctaaaggataggattcaagattggctgcgaaagtctaagcgcttaattattgaagag
gctacaaagaataaaagctttgaattcgataactcacaggagattaggaaatttctttgt
aagcattcaacatctgttggcagagctattgagagtttgataaagattggcagagctaat
tcacaatcaatgttggatctgccacagagagaagggatgtccattcaagctgaacgactc
aactttcatcgttatatctcacatttccgttctgtccataggggttctgcttttgctaaa
atgcgcacgacaactgttaggaagttgcttccggagtcctggggtttcctgtgcccagtt
catacacctgatggggagccttgtggtttactgaatcatatgacttccgcatgccgtatt
tcatccttctaccattcagaaggtgcaatgaaggattttgagaaaataaaggacagactt
ttagccgaattggttcgtggtgggatgatcccattgtcaccaaagatggagcatactggt
cccccggaagtcctacatgtccatttggatggatgcattgttggttctattggttctgct
aagattgaggaattagttaactatattcgaagattaaagctactggcacacccagcgact
ccggaggacttagaagtgggctatgtccccttgagtatcggtggcgcctatcctggtctc
tatttttttacaagtcctgcaagatttgttcgaccagtaaaaaatcttgttagtctacct
gatggagagccacatattgagcttattggagcatttgaacaggcatttatggagatacga
tgtcctgatggtggggatggtgggagaaaagaatcgtttcctgcaacacatgaagaaatt
caccctacagccatgctcagtgtagttgcaaatctgactccttggtctgagcacaaccaa
agtcctcggaacatgtaccaatgccagatggcaaagcaaaccatgggtttttgtggccaa
gctttaaaatttcgtacagatgttaaggcattccatctacagacccctcagtcaccaatt
gttcgaactgctacatataaaaaatatcatatggatgaatttccatcaggaactaatgct
attgttgcggtgctatcgtacacaggttatgacatggaggatgccatgattttgaataaa
tcagctgttgatcgtgggatgttccgtggagatatctaccagaccgagtgcattgacttg
tcaacaacaaggagaggaagtgttgcagaaatatttgccaagagtagtctttcgagagac
tctagcagtgtaattgattcagatggccttcctcgggttggagagacaatagttccaaat
gagcaatattacagtacatataacacactcactggtgcaataaggccaaccagactaaag
ggcacggaaccagcagctattgactatgttgctgtcaacgggacaaactcaaaaggttcc
ctgcagaaggtaaatatccgtctgcgccgcaagagaaatcctataattggcgacaaattc
agcagcagacatgggcaaaagggagtttgttcacagttgtggcctgacattgatatgcct
ttctctgcaaatactggcatgaggccagatcttatcattaaccctcacgcgtttccttca
agaatgaccatagcaatgcttttagagtctatagcagcgaaggctggaagtctacatgga
aatttcgttgatgcaacaccttttgcaagctcagtcaaagagggcgacggaaatccttgg
aaaccgaaatccattgtggatgaaatgggtcccatgcttgcatcctatgggtttaattat
catggagtagaggtcctgtacagtggcctgtttggcaccgagcttacctgtgagattttt
attggacctgtttattaccaacgtcttcgtcatatggtctcggacaaatttcaggttcgc
accacgggccgcatagatcaagtaacaagacaaccaataggaggaagaaaacatggcgga
gggattcggtttggtgagatggagcgtgatgcgctccttgctcatggggcttcctatctc
ctacatgacaggctccattcctgctcggactaccacattgcggatgtgtgctccctctgt
ggaagtctcttgacagcgacggtaataaaatccgagacgcaaatgaaatccaagcgcaac
atgcttggggtccaaactgtgaaacctccaaagaacctggcgtgccaggcctgccaaaca
aacaaaggaatggagacagttgcaatgccgtacgttttcaggtatttggccgcagaattg
gcggccatgaatgtaaagctggatcttcggctcagcaacaggacagaatcccatccccag
caatga
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integrated database retrieval system
